Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08] 26 sequences; 25,862,907 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=5014741 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || || | ||| |||||| | || | ||| ||||| |||||||| | ||| Sbjct 1638130 GCTCGACGAGGTTCTCGTTGACGATGCCATCCGAGGCGGCGAAGAAGGCGAGGATGTGGG 1638071 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||| || || | ||||||||| |||| |||||| | | ||||||||||| Sbjct 1638070 AGATGAAGAAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCGTGCAGGTCCTTGGACA 1638011 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 ||| ||||| ||| || ||||| | || | | |||||||||| ||||| |||| Sbjct 1638010 GGTCAATCTCCTCGGCCGTCCAGAAAGAAGCCTCGTGCTTCTTGTACATTTGCC--AGAT 1637953 Query 110892 CT 110893 || Sbjct 1637952 CT 1637951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094255344320