Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08]
26 sequences; 25,862,907 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 3e-15
>seq1
Length=5014741
Score = 96.9 bits (106), Expect = 3e-15
Identities = 131/182 (72%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771
|||||| || || | ||| |||||| | || | ||| ||||| |||||||| | |||
Sbjct 1638130 GCTCGACGAGGTTCTCGTTGACGATGCCATCCGAGGCGGCGAAGAAGGCGAGGATGTGGG 1638071
Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831
| ||||| || || | ||||||||| |||| |||||| | | |||||||||||
Sbjct 1638070 AGATGAAGAAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCGTGCAGGTCCTTGGACA 1638011
Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891
||| ||||| ||| || ||||| | || | | |||||||||| ||||| ||||
Sbjct 1638010 GGTCAATCTCCTCGGCCGTCCAGAAAGAAGCCTCGTGCTTCTTGTACATTTGCC--AGAT 1637953
Query 110892 CT 110893
||
Sbjct 1637952 CT 1637951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094255344320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |