Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08]
26 sequences; 25,862,907 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 233 3e-55
seq1 176 6e-38
seq4 132 7e-25
seq7 114 2e-19
seq3 100 4e-15
>seq2
Length=4288194
Score = 233 bits (258), Expect = 3e-55
Identities = 353/502 (70%), Gaps = 15/502 (3%)
Strand=Plus/Plus
Query 259681 GCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTT 259740
||||||||||| | | ||| | ||||| | ||| ||| ||||| |||| |||||
Sbjct 3315807 GCACAAGGAGGACTTTGACTCGGCCATTGTCTACGACCGCGACTTCAACTACCAATACTT 3315866
Query 259741 TGGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCG 259800
||| | |||| || || |||||||| ||| | || || | ||||||||
Sbjct 3315867 TGGCTTCAAGACCCTGGAGCGCTCCTACCTCCTCAAGCTCGACGGTAAGATTGTCGAGCG 3315926
Query 259801 GCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAA 259860
||| ||| | ||| |||||||||| ||| |||| | |||| | ||| |
Sbjct 3315927 GCCGCAGCACATGATCATGCGTGTGGCCGTTGGTA--TCTGGGGT----------GACGA 3315974
Query 259861 TGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGC 259920
|| |||||| ||| ||| || ||| | |||||| | |||| ||||| ||
Sbjct 3315975 TG---TGGAGCGCGTTGTCGAGACATACAACTACATGTCCAACAAGTTCTTCACACACGC 3316031
Query 259921 GACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTT 259980
|||| |||||||| || ||||||||||| | | ||| || || ||||| || |
Sbjct 3316032 CTCGCCGACGCTCTTCAACGCCGGCACGCCCCAGGCTCAGCTGTCTTCCTGCTTCCTCGT 3316091
Query 259981 GGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCAT 260040
||||||||||| ||| || ||||||||||| |||||||||||| ||| || | ||
Sbjct 3316092 GGACATGAAGGACGACAGCATTGAGGGCATCTACGACACGCTCAAGACGTGTGCCATGAT 3316151
Query 260041 CTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTA 260100
||||||| ||||||| ||||||||| | | ||| | |||||| | ||| ||||
Sbjct 3316152 CTCCAAGACGGCCGGTGGCATCGGTCTGAATGTCCACCGCATTCGCGCCACCGGCTCCTA 3316211
Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160
| | || |||||||||||| ||||||||| | | || |||||||| || |||||| |
Sbjct 3316212 CATTGCCGGCACCAACGGCACATCCAACGGCATCATCCCTATGCTTCGTGTCTTTAACAA 3316271
Query 260161 CACGGCGCGCTACGTCGACCAG 260182
|||||| |||||||| ||||||
Sbjct 3316272 CACGGCCCGCTACGTGGACCAG 3316293
Score = 168 bits (186), Expect = 1e-35
Identities = 365/541 (67%), Gaps = 20/541 (4%)
Strand=Plus/Plus
Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAACTCGTTGCTC 262938
|||||||||||| | |||||| | | | |||| || |||||||| ||||
Sbjct 3317167 TGGGACTGGGACTCGCTGCGGCTGAAGATCAAGGAGCACGGTGTGCGCAACAGTCTGCTG 3317226
Query 262939 GTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGAG 262998
||||||| ||||| ||||| ||||||||||||| |||||||||| |||| |||||
Sbjct 3317227 GTGGCGCCGATGCCGACGGCGTCGACGTCGCAGATTCTGGGCAACAACGAGTGCTTCGA- 3317285
Query 262999 GTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAA 263057
| ||| |||| |||||||||| |||| || ||||| | ||||| || ||||||||
Sbjct 3317286 GCCATACACGTCCAACATCTACTCGCGGCGTGTGCTGGCCGGCGAGTTCCAGGTGGTCAA 3317345
Query 263058 CCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACCG 263117
|| ||| ||||| | |||| | || |||||| || | || | ||||
Sbjct 3317346 CCCGTGGCTGCTCAAGGACCTGGTCGACATGGGTCTGTGGTCGGACAACATGAAGAACCG 3317405
Query 263118 GCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATCT 263177
||||||||| | || ||| | ||| | || | || | ||| |||| |
Sbjct 3317406 CATCATTGCGGAGAACGGTTCGATCCAGAACATTCCCAAC------ATCCCGGCCGACAT 3317459
Query 263178 CAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATGGC 263234
|||||| || | |||||| ||||||||| | | | || ||| |||| | |||||
Sbjct 3317460 CAAGGCCCTGTACAAGACGGTGTGGGAGATCTCGCAGCG---GACGATTGTGCAGATGGC 3317516
Query 263235 GGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACCC 263294
|| ||||| | ||| | |||||||| |||||||| ||| | || | || ||
Sbjct 3317517 TGCAGACCGTGGTGCCTTTATCGACCAGTCGCAGTCGCTGAACATCCACATGCGTGAGCC 3317576
Query 263295 GAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGAC 263351
||| || | || ||||| |||||| | | ||| | |||||||||||
Sbjct 3317577 GACCATGGGCAAG---ATCACAAGCATGCACTTCACGGGCTGGAAGCTGGGCCTCAAGAC 3317633
Query 263352 TGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGATCA 263411
||||||||||| |||||||| | | | || || | |||| || ||||| ||||| ||
Sbjct 3317634 GGGCATGTACTACCTGCGCACGCAGGCTGCCGCACAGCCCATCCAGTTCACGGTCGACCA 3317693
Query 263412 G 263412
|
Sbjct 3317694 G 3317694
Score = 138 bits (152), Expect = 2e-26
Identities = 342/500 (68%), Gaps = 23/500 (5%)
Strand=Plus/Minus
Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317
||||||||| || ||||| | |||||| |||||||||||| ||| |||||| ||
Sbjct 3450368 CTCCATCTCGCCGAGGCGCAGGCCGCCGTCGCGCGAGCGGCCTTCGGTCGGCTGGCGCGT 3450309
Query 1600318 GAGCATCTGGACGGGGCCGCGTGG-TCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCA 1600376
||| || | || |||| | ||| || | ||| |||||||| | ||| ||| |
Sbjct 3450308 GAGAAT-GGCGCGCGGCCCCTTGGCGCGCGAGTGCATCTTGTCCTGGACCATGTGCTTGA 3450250
Query 1600377 GGGCCTGGTAGTAGACCGGCGCCGTAAAGATCAACGCCTCCATGGGCTCGCCGGTG-TGC 1600435
|| ||||||||||| ||| | | ||||| ||||| | ||||||||||||| |||
Sbjct 3450249 GGCGCTGGTAGTAGATGGGCCCGTTGAAGATGTGGGCCTCGAGGGGCTCGCCGGTGATGC 3450190
Query 1600436 GGGTGGTAGAGCACCTCCTTGCCGTAGCGCTCGCATCCGTGGCGAGCCAACTCGGCGGCG 1600495
| ||| |||| |||||||| | | | | |||| ||| | | ||||||| |
Sbjct 3450189 CCGAGGTGAAGCA-GTCCTTGCCCTCCCAGGAGAAGCCGTTGCGGACGAGCTCGGCGCCC 3450131
Query 1600496 ACATCGTCGACGGTGACGCCGCCAAAGGGCGT-GCCGTCGCCCACATAGC--CCTCGCGG 1600552
| | ||||||| || | | | ||||| ||| | ||| | || | || |||
Sbjct 3450130 ATGGCCTCGACGG-GATGGGAGCGGAAGGCGTCGCCATAGCCGTAGTCGCGGCGTC-CGG 3450073
Query 1600553 CA--GGCC---ACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACG 1600607
|| | || ||||||| ||| ||| | || |||||| | ||||| |||||||
Sbjct 3450072 CAACGACCGAGGCCTTGCCGGTGAGACACTCAAACAGCTTGCCGACAGTCATACGCGACG 3450013
Query 1600608 GGATGGCGTGCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGC-GACCAGGGC 1600666
||| |||| ||||| || | |||||||| | | |||| | | | || |||||
Sbjct 3450012 GGAAACCGTGGGGGTTCATGATGATGTCGGG---GACGAGGCCG-GTGTCGGAAAAGGGC 3449957
Query 1600667 ATGTCCTC--GGTGGAGCGCACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGACA 1600724
||||| || | | || || | | |||| ||| |||||||||||||||||| ||||| |
Sbjct 3449956 ATGTCTTCCTGCTCGA-CG-ATGATGCCGACGACGCCCTTTTGGCCGTGGCGGGACGAGA 3449899
Query 1600725 GTTTGTCGCCCACCTCGGGC 1600744
|||||||| | |||||||
Sbjct 3449898 ACTTGTCGCCGATCTCGGGC 3449879
Score = 105 bits (116), Expect = 1e-16
Identities = 317/483 (66%), Gaps = 18/483 (4%)
Strand=Plus/Plus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTT-TGCCTGCTACCTGGAACCGTGGCACGCCGACCT 261846
|| ||| ||||||| || ||||| ||| | |||| |||| |||||||||||||| |
Sbjct 3316294 GGTGGCAACAAGCGCCCCGGTGCCTTCTGCAT-CTACTTGGAGCCGTGGCACGCCGATGT 3316352
Query 261847 CATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCG 261906
| | | | |||||||| |||||||| || |||| |||| ||| || || |
Sbjct 3316353 CTTTGAGTTCCTGGACCTGCGGAAGAACCAGGGTAAGGA----GGAGGTCCGTGCCCGTG 3316408
Query 261907 CGATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCG 261966
|||| || || || |||| ||| ||||| ||| || ||| |||| | |
Sbjct 3316409 --ATCTTTTCCTCGCTCTCTGGATCCCCGATCTGTTCATGAAGCGTGTGGAGACCAACGG 3316466
Query 261967 CGACTGGTCGCTCTTTTGCCCGTCCGAG-GCGCCCGGCCTGCACGAATGCTATGGCGCGG 262025
||| ||| |||| | ||||| ||| ||||| |||||| || ||||| |||| ||
Sbjct 3316467 CGAGTGGACGCTGATGTGCCCCAATGAGTGCGCC-GGCCTGGCGGATTGCTACGGCGAGG 3316525
Query 262026 CCTTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGC 262082
||||| || || || ||| || || ||| |
Sbjct 3316526 AGTTTGAGGCGCTGTACGAGAAGTACGAGAGCGAGGGCCGTGGTCGTAAGAAGGTCAAGG 3316585
Query 262083 CCGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACA 262142
|| || || || | |||| |||||| | | ||| || | ||||| |||| || | ||
Sbjct 3316586 CC-CA-GA-AGCTGTGGTACGCCATTCTGGAGGCGCAGACGGAGACGGGCAACCCGTTCA 3316642
Query 262143 TGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACA 262201
|| ||||||||||| | ||||| | ||||||||| ||||||||||||||| | ||
Sbjct 3316643 TGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGCA 3316702
Query 262202 GAGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGC 262261
| | ||||||||||| ||||| || ||| ||| |||| ||||| ||||||
Sbjct 3316703 G-CTCGAACCTGTGCACGGAGATTGTGGAGTACTCGGCGCCGGACGAGGTGGCCGTGTGC 3316761
Query 262262 AAC 262264
|||
Sbjct 3316762 AAC 3316764
Score = 87.8 bits (96), Expect = 3e-11
Identities = 65/75 (87%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 1817556 CGTCACCTCGGCGCGCGCGTC-TCAGACTGGGGCACATGGAGGTTCATCTCGTCGCCGTC 1817614
|||| |||| ||||| || || || | ||| ||||| || ||||||||||||||||||||
Sbjct 4001740 CGTCGCCTCTGCGCGTGCCTCCTCCGTCTGCGGCACGTGCAGGTTCATCTCGTCGCCGTC 4001681
Query 1817615 AAAGTCGGCATTGTA 1817629
|||||||||||||||
Sbjct 4001680 AAAGTCGGCATTGTA 4001666
Score = 86.0 bits (94), Expect = 9e-11
Identities = 224/337 (66%), Gaps = 11/337 (3%)
Strand=Plus/Minus
Query 1601143 GCCGCGGTCGACAAAGTCCTGCTTGAGCACGAGCGAGTCCTCCTGGTTGTAG---GGGTC 1601199
|||||| || | | || ||| ||||||||||| | ||||| | |||| | ||
Sbjct 3449510 GCCGCGATCAATAGAGGCCTTGTTGAGCACGAGGGCATCCTCGATATCGTAGCCCGAGTA 3449451
Query 1601200 GCTCATGATGGCCACGCGCGCATTCTGGCCCATCGGGAGGCGCGTGGCGCCGATGACGTC 1601259
| ||||| | | ||| || |||||||| ||| || | || || | |||
Sbjct 3449450 GGACATGACGACGACGGTGGCGTTCTGGCCGGCCGGCAG---CTTGTCGTAGTGCACGAG 3449394
Query 1601260 CTCCATGGC---GGTCTGCACCAGCGGCACCTGCGGGTAGCACAGGGCGTGCGACACCGT 1601316
||| |||| ||| ||||| ||| |||||||||| |||| || | || |||
Sbjct 3449393 CTCAATGGTCTTGGTGATCACCATGGGCCGCTGCGGGTAGACGAGGGTGTACAGCAGCGT 3449334
Query 1601317 GTCGATGGCATGGTCGGCGTTGAGCGACACGACGGCCTTGCTCTGCTTGCCCATGGCCGT 1601376
||||||| ||| |||| | | | || | || |||||||||||||||
Sbjct 3449333 GTCGATGCGGTGGAACTGGTTGTAGGCAATGGCGCCGATGGCCTGCTTGCCCATGGCGCA 3449274
Query 1601377 CTGGTAGATGTTGCGCGGCGCCTGGTTGTGGTTGGAAAACGGGATGATGGACGCGCA-GG 1601435
|||||| |||| ||||||| ||||||||||| | || ||||||| || || || ||
Sbjct 3449273 TTGGTAGGTGTTTCGCGGCGACTGGTTGTGGTGCGGGAAGGGGATGA-GGCCGGCCACGG 3449215
Query 1601436 CGCCCAGCATGAGCAGCGGGTGGACCTCGACGTGCGT 1601472
|||| || ||| | || | || ||||| ||||||
Sbjct 3449214 CGCCGAGGATGGTAAAGGGCTCGATCTCGAGGTGCGT 3449178
>seq1
Length=5014741
Score = 176 bits (194), Expect = 6e-38
Identities = 243/335 (73%), Gaps = 5/335 (1%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||| |||||| || || ||||| ||||||||| | ||||
Sbjct 1637952 GATCTGGCAAATGTAC-AAGAAGCACGAGGCTTCTTTCTGGACGGCCGAGGAGATTGACC 1638010
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891
| | ||| | | ||||| ||| ||| ||||||||||||| ||||||
Sbjct 1638011 TGTCCAAGGACCTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTTCTTCATCT 1638070
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||| |||||||||| || ||||||| ||||||||||| ||||||||| | ||
Sbjct 1638071 CCCACATCCTCGCCTTCTT-CGCCGCCTCGGATGGCATCGTCAACGAGAACCTCGTCGAG 1638129
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | |||||||| |||| ||||| || | |||||||| |||||||||
Sbjct 1638130 CGCTTCAGCGCCGAGGTCCAGGTGCCCGAGGCCCGCTGCTTTTACGGCTTCCAGATCATG 1638189
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || ||||| ||||| || |||||||| || || || ||||||||| ||||||| ||
Sbjct 1638190 ATGGAGAACATTCACTCCGAGACCTACTCTCTGCTCATTGACACCTACATCAAGGAGCCC 1638249
Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACAC 1456106
||| ||||||||| |||||| || ||
Sbjct 1638250 AAGGAGCGCACCCACCTCTTCAACGCCATTGATAC 1638284
Score = 140 bits (154), Expect = 5e-27
Identities = 186/253 (74%), Gaps = 4/253 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|| |||||||| |||||| |||| ||| | |||||| | | |||| | ||||| ||
Sbjct 1638627 ATTATCGTCGATGCCGTCAAGATTGAGCAGGAGTTTTTGACCGAGGCCCTGCCCTGTGCT 1638686
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| | ||||||||||||||| |||||| |||||||||| | || || |||||||| |
Sbjct 1638687 CTTCTGGGCATGAACGCCACC-CTCATGAAGCAGTACATTG-AGTTCGTTGCCGACCGTC 1638744
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
|||| | || |||||| | || ||| |||||| | |||| || || | |||
Sbjct 1638745 TGCTGGTCGCTCTCGGCAAC-GACAAGGTCTACCGCTCCACCAATCCCTTTGACTTTATG 1638803
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
||| ||||| || | |||||||||||||| |||||| ||||| ||||| |||
Sbjct 1638804 GAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCAG 1638863
Query 1456762 AAGGCCGGCGTCA 1456774
|||||||| ||||
Sbjct 1638864 AAGGCCGGTGTCA 1638876
Score = 93.3 bits (102), Expect = 6e-13
Identities = 117/157 (75%), Gaps = 9/157 (6%)
Strand=Plus/Plus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCG 1456179
|| |||||||| ||||| || ||||| | |||||||| || || ||||||
Sbjct 1638366 AAGAAGGCCGAGTGGGCCCTGCGCTGGATTTCCGACAAGGAG----TCCAC-CTTTGCGC 1638420
Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238
|||| ||||| | ||||| || ||||||||||| || ||| ||| |||| |||
Sbjct 1638421 AGCGCCTCGTGGCATTTGCTGCCGTCGAGGGCATTTTCTTCAGCGGCGCCTTCTCGTCCA 1638480
Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|||| |||||||||||||| ||||| ||||| |||||
Sbjct 1638481 TCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCT 1638517
>seq4
Length=2521912
Score = 132 bits (146), Expect = 7e-25
Identities = 337/498 (68%), Gaps = 26/498 (5%)
Strand=Plus/Minus
Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317
|||||||||||| | || | || || ||||| || ||||||||||||||| ||
Sbjct 2220704 CTCCATCTCTCCGAACCGAAGACCACCGTCGCGCGCACGACCCTCGACCGGCTGCCGCGT 2220645
Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377
| ||||| || |||||||| | || || || ||||||||| ||| ||| |||||
Sbjct 2220644 CATGATCTGCACAGGGCCGCGCGCCCGCGCATGGATCTTGTCGTCCACCATGTGTCGCAG 2220585
Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTAAAGATCAACGCCTCCATGGGCTCGC---CGGTGTG 1600434
||||||||| |||| | ||| | | |||| || ||| || | |||||
Sbjct 2220584 TCGCTGGTAGTACGTCGGCCCGAAAAACACCTGCGCCCGCA---GCTTGCGTCCCGTGTG 2220528
Query 1600435 CGGGTGGTAGAGCACCTCCTTGCCGTAGCG-CTCGCATCCGTGGCGAGCCAACTCGGCGG 1600493
|||||| | | ||| ||| ||| || | | || || | || | | ||
Sbjct 2220527 GCCGTGGTACATGATCTCGAAGCCCC-GCGACTGGTAGCCATG-CTCGCGCAG-CAGCCC 2220471
Query 1600494 CGACATCG--TCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCCCTCGCG 1600551
||||| || || || || ||| | ||| ||||| |||||||| | ||||| | |
Sbjct 2220470 CGACACCGAGTCCACCGTCACGTCCGTAAACGGCGTCGCGTCGCCCTCCATGCCCTTGAG 2220411
Query 1600552 GCAGGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGAT 1600611
|||||||||| ||| || ||| |||| | | | || ||||| |||||||| ||
Sbjct 2220410 CGTCGCCACCTTGCTCAGCAGACACTCGATCAAATGGGCAATCGTCATACGCGACGGAAT 2220351
Query 1600612 GGCGTGCGGGTTGATCACAATGTCGGGCGTG--GCACCGCCGCGAGGCGACCAGGGCATG 1600669
||||||||||||||| | ||||||||||||| || || || | || | ||||||
Sbjct 2220350 GGCGTGCGGGTTGATGATAATGTCGGGCGTGATGC-CCTCCAC----CGTAAACGGCATG 2220296
Query 1600670 TCCTCGG--TGGAGCG-CACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGACAGT 1600726
||||| | || || ||| || | |||||||| || ||||| ||||||| |
Sbjct 2220295 TCCTCCGAACGGTACGTCAC---ACCAATCGTGCCCTTCTGTCCGTGTCGCGACGCAAAC 2220239
Query 1600727 TTGTCGCCCACCT-CGGG 1600743
|||||||| | || ||||
Sbjct 2220238 TTGTCGCCAATCTGCGGG 2220221
>seq7
Length=1620073
Score = 114 bits (126), Expect = 2e-19
Identities = 115/147 (78%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 165748 TGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACC 165807
|||| |||||| | || ||||||||||| || |||||||||||||||||| ||||||
Sbjct 476107 TGGCCGACCTGCTGTCGGTCGGCGCCGTCGGCGCCCGCACCACCGAGAGCCAGCTGCACC 476166
Query 165808 GCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA-GC 165866
||||| |||| |||| ||| | | ||| | |||||||| ||| |||||||||||| ||
Sbjct 476167 GCGAGCTGGCCTCGGGCCTGTCCTTCCCCGTCGGCTTCAAGAACGGCACCGACGGCACGC 476226
Query 165867 GTGGCGACGGCCCTCGATGCCGTGCGC 165893
|||| |||| | || ||| | |||
Sbjct 476227 TGGGCG-TGGCCATTGACGCCATCCGC 476252
Score = 87.8 bits (96), Expect = 3e-11
Identities = 105/139 (76%), Gaps = 8/139 (6%)
Strand=Plus/Minus
Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCT---T 1600314
||||||||| || | ||||| |||||| |||| |||||||| || ||||| |
Sbjct 707906 CTCCATCTCGCCGACGCGGATGCCGCCGCCGCGCTTGCGGCCCTTGATGGGCTGGCCGGT 707847
Query 1600315 GGTGAGCATCTGGACGGGGCCGCGTGGT-CGGGCGTGAATCTTGTCGATGGCCACGTGGC 1600373
|||| ||| |||||||||| ||||| ||| | || | ||||||| || ||| |||||
Sbjct 707846 GGTGGGCAC---GACGGGGCCG-GTGGTGCGGACCTGGAACTTGTCGTTGACCATGTGGC 707791
Query 1600374 GCAGGGCCTGGTAGTAGAC 1600392
|||| ||||||||||||
Sbjct 707790 GCAGCCGCTGGTAGTAGAC 707772
>seq3
Length=3655701
Score = 100 bits (110), Expect = 4e-15
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911
|| ||||| || || ||| | | ||||| || ||||| || |||||| | ||| |||
Sbjct 2537074 TGCGCGTCCGTCAGCCGCGCGTACCGCAGAATCGCACACCGCGACTGCAGCGGCTCAATG 2537015
Query 332912 ACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATG 332971
| | | |||| |||||| || | |||||||||||||| || | | | |||||
Sbjct 2537014 ATCTTGTTCGACTGGTTGCACGCAAACGCAAACCGCGTCGTGTTCGAGTAGATCTCCATC 2536955
Query 332972 GTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATG 333031
||| ||| || ||||| || ||| ||| ||| | || ||| |||||||| || || |
Sbjct 2536954 GTCCGCCGCAGCGCCTGCTGCGCCCCCGACGTCATGCTGTCCGCCTCGTCCAGAATCACA 2536895
Query 333032 ATCTTGTGGCGCCCGTGCGGCAG 333054
|||||||| || || ||||||
Sbjct 2536894 ATCTTGTGCCGTCCCGCCGGCAG 2536872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177808692252212
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