Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08]
26 sequences; 25,862,907 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq2 134 1e-26
seq10 122 9e-23
seq3 104 2e-17
>seq2
Length=4288194
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| ||||| || ||||| || ||||||||||| | |||| | || ||
Sbjct 328656 ACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCC 328597
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| ||||| |||| |||||||| || ||||| ||||| || || || |||
Sbjct 328596 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGCGGAATGCCCTCCTTGTCCTGA 328537
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | ||||||||||| || || |||||||| ||||| ||
Sbjct 328536 ATCTTGCTCTTGACATTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTG 328477
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| | || || ||||| || |||||
Sbjct 328476 CCGGTAAGCGTCTTGACGAAGATCTGCAT 328448
Score = 131 bits (144), Expect = 2e-25
Identities = 610/955 (64%), Gaps = 19/955 (2%)
Strand=Plus/Plus
Query 7654 TTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCG 7713
|| || ||||| ||||| || | || ||| ||||| | | |||| |||| ||
Sbjct 3316021 TTCACACACGCCTCGCCGACGCTCTTCAACGCCGGCACGCCCCAGGCTCAGCTGTCTTCC 3316080
Query 7714 TGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGAT 7773
|| || | | |||| || |||||||| || ||||| ||| ||||||| | ||
Sbjct 3316081 TGCTTCCTCGTGGACATGAAGGACGACAGCATTGAGGGCATCTACGACACGCT-CAAGAC 3316139
Query 7774 -TGCGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGAACGTAAACGACGTGCGCG 7831
|| |||| || ||||| ||||| || || || |||||||| || || | | ||||
Sbjct 3316140 GTGTGCCATGATCTCCAAG-ACGGCCGGTGGCATCGGTCTGAATGTCCACCGCATTCGCG 3316198
Query 7832 CCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGC 7891
||| ||| | ||| | ||||||||| | | ||| ||| | || ||| | |
Sbjct 3316199 CCACCGGCTCCTACATTGCCGGCACCAACGGCACATCCAACGGCATCATCCCTATGCTTC 3316258
Query 7892 GCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAA---GCGCAAAGGCGCCG 7948
| || || || ||| ||| || | || |||||||| || || |||| || |||
Sbjct 3316259 GTGTCTTTAACAACACGGCCCGCTACGTGGACCAGGGTGGCAACAAGCGCCCCGGTGCCT 3316318
Query 7949 -CTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGC 8007
|||| ||||| ||||||||||||||||| || | | | | || | |||||
Sbjct 3316319 TCTGC-ATCTACTTGGAGCCGTGGCACGCCGATGTCTTTGAGTTCCTGGACCTGCGGAAG 3316377
Query 8008 AACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGAT 8067
||| |||| || || | || || ||||| ||| ||| | ||| | ||||||
Sbjct 3316378 AACCAGGGTAAGGAGGAGGTCCGTGCCCGTGATCTTTTCCTCGCTCTCTGGATCCCCGAT 3316437
Query 8068 CTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGC 8127
||||| |||| ||| || | | ||| | ||| |||| ||||||||| || |||
Sbjct 3316438 CTGTTCATGAAGCGTGTGGAGACCAACGGCGAGTGGACGCTGATGTGCCCCAATGAGTGC 3316497
Query 8128 CCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACAC 8187
| | | ||||| | ||||| ||||| | | ||||| |
Sbjct 3316498 GCCGGCCTGGCGGATTGCTACGGCGAGGAGTTTGAGGCGCTGTACGAGAAGTACGAGAGC 3316557
Query 8188 GACGG-CGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATTATCGAATG 8246
|| || || | ||| | | || || || | | ||| ||||||| | ||
Sbjct 3316558 GAGGGCCGTGGTCGT-AAGAAGGTCAAGGCCCAGAAGCTGTGGTACGCCATTCTGGAGGC 3316616
Query 8247 TCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAA 8306
|| | || || || | |||| |||||| ||||| ||| |||||| ||| |||||
Sbjct 3316617 GCAGACGGAGACGGGCAACCCGTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAA 3316676
Query 8307 TCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAG 8366
|| | ||| |||||||||| | || || |||||| | || ||||| |||||
Sbjct 3316677 CCAGAAGAACCTGGGCACCATCCGCAGCTCGAACCTGTGCACGGAGATTGTGGAGTACTC 3316736
Query 8367 CGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTTCGTTGA 8426
||||| ||||| |||||||| ||||| | || ||| || | | | |||||
Sbjct 3316737 GGCGCCGGACGAGGTGGCCGTGTGCAACTTGGCCTCGCTGGCTCT----TCCGTCGTTCG 3316792
Query 8427 TCGACGCT--CAA--ACACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAGTGACGG 8482
||||| | ||| | | || ||||| | | || | ||| | ||| || |
Sbjct 3316793 TCGACTATAACAACGAGTCGTATGACTTCCAGCGGCTGCACGACGTCACGCAGTTGGTTG 3316852
Query 8483 TACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCGCGTAT 8542
| ||||| | | ||||||||||| || || | || ||| || || || ||
Sbjct 3316853 TCCGCAACCTCAACCGCATCATTGACGTGAACTACTACCCCGTGCCCGAGGCACGAAACA 3316912
Query 8543 CGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTT 8597
|||||||||||| | ||| |||| |||| ||||| |||||||| ||||| ||
Sbjct 3316913 GCAACATGCGCCACCGGCCCATTGGTCTGGGTGTGCAGGGTCTGGCAGACGCCTT 3316967
Score = 123 bits (136), Expect = 3e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||| | ||| ||||| || ||||| ||||||||||||||| | || |
Sbjct 329121 AGACGCAGCACCAAGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTCCGG 329062
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || | ||| ||||| |||||||||| |||||||| || ||||| ||||| ||
Sbjct 329061 CCGTCTTCCAACTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCTGGCGGGATGCCCTCC 329002
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| ||||| || || ||||| ||| | ||||| ||||| || || || | |||
Sbjct 329001 TTGTCTTGGATCTTGCTCTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCCAACGTA 328942
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || || || || ||||||||
Sbjct 328941 ATCGTCTTGCCCGTCAAGGTCTTGACAAAGATTTGCAT 328904
Score = 123 bits (136), Expect = 3e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||| ||||| || || || ||||| || |||||||||||| | || |
Sbjct 329349 AGACGCAGCACCAGGTGCAGTGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTCCGG 329290
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || | ||| ||||| |||||||||| |||||||| || ||||| ||||| ||
Sbjct 329289 CCGTCTTCCAACTGCTTGCCCGCAAAAATCAGGCGCTGCTGGTCTGGCGGAATGCCCTCC 329230
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | ||||| || |||||||| || || |||
Sbjct 329229 TTGTCCTGGATCTTCGACTTGACGTTGTCAATGGTGTCCGAGGATTCCACTTCCAGCGTA 329170
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || | || || |||||||| |||||
Sbjct 329169 ATCGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCAT 329132
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || ||||||||||| || ||||||||||||
Sbjct 328446 CCACCACGGAGACGAAGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 328387
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| || ||||| ||||| || || || | ||||||||| ||||| ||
Sbjct 328386 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGGGGA 328327
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | || || || || || ||
Sbjct 328326 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGAAGACTCGACC 328267
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || ||||| | || || |||||||| |||||
Sbjct 328266 TCAAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAAATCTGCAT 328220
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| ||||| || ||||| || ||||||||||| | |||| | || ||
Sbjct 328884 ACCAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCC 328825
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| ||||| |||| |||||||| || ||||| ||||| || || |||||
Sbjct 328824 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCTTGG 328765
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | ||||| ||||| || || || | ||||| || ||
Sbjct 328764 ATCTTGCTCTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCCAACGTAATCGTCTTG 328705
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || ||||||||
Sbjct 328704 CCCGTCAAGGTCTTGACAAAGATTTGCAT 328676
>seq10
Length=919426
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| |||| ||| ||||| |||||| ||||| || ||||||||||||
Sbjct 645314 CCACCACGGAGCCGCAGCACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 645255
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| |||||||| || |||| |||||||| || || ||
Sbjct 645254 AGGGTCCGGCCGTCCTCCAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGA 645195
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | ||||||||||| |||||
Sbjct 645194 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACC 645135
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || || | || || ||||| || |||||
Sbjct 645134 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 645088
>seq3
Length=3655701
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| ||||| || || || ||||| || |||||||||||| | || |
Sbjct 2673573 AGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTCCGG 2673632
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| |||||||| ||||| ||||| |||| |||||||| || ||||| ||||| ||
Sbjct 2673633 CCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCC 2673692
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | ||||| || || || || ||||| ||
Sbjct 2673693 TTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTG 2673752
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
||||| || || || | || || ||||||
Sbjct 2673753 ATGGTCTTGCCCGTGAGGGTCTTCACGAAA 2673782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398235745520
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