Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq42 102 2e-16
>seq42
Length=705881
Score = 102 bits (112), Expect = 2e-16
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473
|||||||| | || ||| | || ||| || | ||||||||| | || |||
Sbjct 321568 AGGAGTTCCTGACGGAGGCTCTGCCGTGTGCTCTGCTGGGCATGAACTCCACCCTCATGA 321509
Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533
|||||||| || || || |||||||| | | || || || || |||| || ||||
Sbjct 321508 AGCAGTACATTGAGTTTGTTGCCGACCGTCTGCTGGTCGCCCTCGGCAACGACAAGGTGT 321449
Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593
|| || | |||||||| | ||||||||| ||| || || || ||||||||||
Sbjct 321448 ACCGTTCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTGGGTGGCAAGACCAACT 321389
Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
|||| || ||||| ||| ||||||| |||| | | ||||| |||
Sbjct 321388 TCTTTGAGAAGCGCGTCGGTGACTACCAGAAGGCCGGTGTCATG 321345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823417205090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |