Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq39 82.4 7e-11
>seq39
Length=779030
Score = 82.4 bits (90), Expect = 7e-11
Identities = 118/164 (72%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 20930 ATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGT 20989
||||||||||| || || |||||||| |||| | ||| || | ||||| ||
Sbjct 713381 ATCAACGTGGTCCACATACACATGGGCGTCGCCCATGACATGCGTAA-GACTCCCTGGTA 713439
Query 20990 CAGGCCCGTGA-CGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048
| | || | |||| || | || | |||||| ||||| |||||||| ||||| ||||
Sbjct 713440 CCAGATCGCAAACGTGTGCCAGCATGTGCGTCAGCAGGGCATAGCTGGCAATGTTGAACG 713499
Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092
| || || ||||||||||| ||| | ||||||| |||||||
Sbjct 713500 GCACACCAAGGCCCATGTCACAGGATCGTTGGTACAACTGGCAG 713543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427775775818640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |