Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq39 82.4 7e-11 >seq39 Length=779030 Score = 82.4 bits (90), Expect = 7e-11 Identities = 118/164 (72%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 20930 ATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGT 20989 ||||||||||| || || |||||||| |||| | ||| || | ||||| || Sbjct 713381 ATCAACGTGGTCCACATACACATGGGCGTCGCCCATGACATGCGTAA-GACTCCCTGGTA 713439 Query 20990 CAGGCCCGTGA-CGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 | | || | |||| || | || | |||||| ||||| |||||||| ||||| |||| Sbjct 713440 CCAGATCGCAAACGTGTGCCAGCATGTGCGTCAGCAGGGCATAGCTGGCAATGTTGAACG 713499 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 | || || ||||||||||| ||| | ||||||| ||||||| Sbjct 713500 GCACACCAAGGCCCATGTCACAGGATCGTTGGTACAACTGGCAG 713543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775775818640