Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq22 82.4 8e-11
>seq22
Length=1908885
Score = 82.4 bits (90), Expect = 8e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
||||| || || || |||||||| ||| | |||| || ||||| || || |||
Sbjct 662917 GTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCA 662976
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| ||||||| || ||||| || || || ||||| || ||||| ||| || ||
Sbjct 662977 GCAAAGATCAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGAATCTTGCTCTTG 663036
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | |||||| | | || || || | ||| | ||||||||||| | |||
Sbjct 663037 ACATTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGTGTC 663096
Query 143168 TTTACGAATATTTGCATA 143185
|| || || |||||||||
Sbjct 663097 TTGACAAAGATTTGCATA 663114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507014127479760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |