Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq22 82.4 7e-11 >seq22 Length=1908885 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| ||||||||||| || || ||||| || | ||| || || || || | Sbjct 662671 CGCAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTCCGGCCG 662730 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || || | || || | | ||||| || ||||| ||||| || ||| Sbjct 662731 TCCTCCAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTG 662790 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || | ||| ||| | ||| ||||||| || || || | ||| || Sbjct 662791 TCTTGGATCTTCGACTTTACGTTGTCGATTGTGTCAGACGACTCAACTTCCAACGTAATC 662850 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || |||||||| ||||| Sbjct 662851 GTCTTGCCGGTGAGTGTCTTGACAAAGATTTGCAT 662885 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCC 94855 ||||| ||| | || || ||||| || | ||| || ||| | || || || ||| Sbjct 663132 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG--AGAGGGTGCGACCGTCC 663189 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||| ||| || || ||||||| | | ||||| ||||| || || || || ||||| Sbjct 663190 TCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCC 663249 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||| || | ||||||| | | | || || | ||||| |||| |||||||| Sbjct 663250 TGAATCTTGGACTTGACGTTGTCAATGGTATCGGAAGACTCGACCTCAAGGGTGATGGTC 663309 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || || || || || || || |||||||||||| Sbjct 663310 TTGCCGGTGAGCGTCTTGACGAAGATCTGCATG 663342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290959043480