Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq22 82.4 7e-11
>seq22
Length=1908885
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| ||||||||||| || || ||||| || | ||| || || || || |
Sbjct 662671 CGCAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGACAGTGTCCGGCCG 662730
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||||||| || || | || || | | ||||| || ||||| ||||| || |||
Sbjct 662731 TCCTCCAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTG 662790
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | ||| ||| | ||| ||||||| || || || | ||| ||
Sbjct 662791 TCTTGGATCTTCGACTTTACGTTGTCGATTGTGTCAGACGACTCAACTTCCAACGTAATC 662850
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || || |||||||| |||||
Sbjct 662851 GTCTTGCCGGTGAGTGTCTTGACAAAGATTTGCAT 662885
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCC 94855
||||| ||| | || || ||||| || | ||| || ||| | || || || |||
Sbjct 663132 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG--AGAGGGTGCGACCGTCC 663189
Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915
|||| ||| || || ||||||| | | ||||| ||||| || || || || |||||
Sbjct 663190 TCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCC 663249
Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975
| ||| || | ||||||| | | | || || | ||||| |||| ||||||||
Sbjct 663250 TGAATCTTGGACTTGACGTTGTCAATGGTATCGGAAGACTCGACCTCAAGGGTGATGGTC 663309
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|| || || || || || || ||||||||||||
Sbjct 663310 TTGCCGGTGAGCGTCTTGACGAAGATCTGCATG 663342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290959043480
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |