Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq41 480 2e-130
seq42 233 4e-56
>seq41
Length=3900177
Score = 480 bits (532), Expect = 2e-130
Identities = 1248/1875 (67%), Gaps = 73/1875 (4%)
Strand=Plus/Plus
Query 243741 TGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799
||||||||| ||| || | |||| |||| || | ||||||||||||||| ||||| ||
Sbjct 916954 TGAACTGGATCGGCTGTG-CGGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTCTTCAGG 917012
Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859
|| |||| | || ||||||| ||| | ||| ||| |||||
Sbjct 917013 CCCAGCTTCCAGCCCGTGAAGTGCATGCTCGTGATCTTGCCCAT-----------GGTCG 917061
Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919
| || | || || ||| || ||||| |||||||| |||| | || || ||
Sbjct 917062 GC-TCACGCATGTGGATGTTCAGCGACTGCGACTGGTCGATAAAGGCACCACGGTCCGCA 917120
Query 243920 GCCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978
||||| | | |||| |||||| ||||| || |||||||||| | | |||||
Sbjct 917121 GCCATCTGCACAATCGTCCG-CTGAGAGATCTCCCACACCGTCTTGTACAGAGCCTTGAT 917179
Query 243979 GTGCTCGGGGAACCCTTCG--ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTG 244036
|| | |||| || | |||||||| | ||| || || | | | |||| || |
Sbjct 917180 GTCTGCCGGGATG--TTGGGAATGTTCTGGATCGAACCGTTCTCGGCAATGATGCGGTTC 917237
Query 244037 CGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACC 244096
|||||| || |||||| |||| | |||| ||| || ||| | ||| |||
Sbjct 917238 TTCATGTTGTCCGACCACAGACCCATGTCGACCAGGTCCTTGAGCAGCCACGGGTTGACC 917297
Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156
||||| ||||| || | |||||| || ||| ||| | |||| || |||||||| |
Sbjct 917298 ACCTGGAACTCACCGGCCAGCACACGCCGCGAGTAAATGTTGGATGTGTACGGCTCGAAG 917357
Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216
| ||| |||||||||| ||||| | ||| ||| |||||||| |||| ||||||||||
Sbjct 917358 CACTCGTTGTTGCCCAGAATCTGTGACGTCGACGCCGTCGGCATCGGCGCCACCAGCAGA 917417
Query 244217 CTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCC 244276
||||| | ||| |||||| || ||| || | ||| || ||| ||||||| | ||
Sbjct 917418 CTGTTGCGCACACCGTGCTCCTTGATCTTCAGCCGCAGCGAGTCCCAATCCCACAGGTCC 917477
Query 244277 GAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGG 244336
|| | |||| || |||||||||| |||||| | |||| || ||
Sbjct 917478 GA-------TGGCGT--GACATCCCACATGTCGGGCTGCAGAATACCCTGCGACACAGGA 917528
Query 244337 CTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTCGAG 244395
||||| || ||| |||||| || || || |||||||| || ||| ||| ||
Sbjct 917529 GACCCCTCATATGTCTGGTAGGTGCCCTCAATCTTGGCCAGCTCGCACGACTCCGTC-AG 917587
Query 244396 GGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT 244455
|| |||| |||||||||||| |||| | |||||||| ||| |||| | |
Sbjct 917588 CGCCGCGTGGTAGATGGTCTCAAAGACCTGCTTGTTCAGCAGGCGTGCCTCGGGAGACTC 917647
Query 244456 GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGG 244515
||||| |||| || | || |||| |||| ||||| |||||||| || | || |||||
Sbjct 917648 AAAGGGCATGCGCAGCGCCAGGAAGGCGTCCGCCAGACCCTGCACACCCAGACCAATGGG 917707
Query 244516 TCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCAC 244575
| ||| ||| |||| | | ||||| ||||| ||||| ||||| | || || |
Sbjct 917708 ACGGTGGCGCATGTTACTGTTCCGTGCTTCTGGCACAGGGTAGTAGTTGACATCAATGAT 917767
Query 244576 CTTGTTGAGGTTGCGGGTGATCA--TGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTAC 244633
||| ||||||||| | || |||| ||| ||| ||| ||| ||||| |||
Sbjct 917768 GCGGTTCAGGTTGCGGACAACCAGCTGCGT--GACATCGTGCAGTCTCTGGAAGTCATAC 917825
Query 244634 TCGTAGGGATCCTCGGCGATGGTGATCCTC-AC-AAACTCGTTGAGGGCGACGCTGGCCA 244691
|| |||| | || || || || ||| || || || | |||||
Sbjct 917826 -------GA--CTCG----TTGTTATAGTCGACGAAAGACGGA-AGAGCCAAAGAGGCCA 917871
Query 244692 GGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTAC 244751
|||||| || |||||||| |||| | ||||| ||||||||| ||||| | |||
Sbjct 917872 AGTTGCACACAGCCACCTCGTCCGGAGCCGAGTACTCGACAATCTCCGTGCACAAGTTCG 917931
Query 244752 TGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGA 244811
|| |||||| ||||||| || || ||| |||| ||||||| |||||||||||
Sbjct 917932 AGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGA 917991
Query 244812 GCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAG 244871
|||||||||| || ||||| ||| || | || | | | ||| || | | |
Sbjct 917992 GCATGAAGGGGTTGCCCGTCTCCGTCTGCGCCTCCAGAATGGCATACCACAGCTTCTGGG 918051
Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931
|||||| | || ||||| | ||||| |||||| |||||| ||||| ||||
Sbjct 918052 CCTTGATCTTCTTGCGACCGCGACCCTCGCGCTCGTATTTCTCGTACAGAGCCTCAAACT 918111
Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCCACTC 244989
| ||| || || | ||||||| ||| || | |||||||| || |||||||
Sbjct 918112 CCTCGCCGTAGCAATCAGCCAGGCCGGCGCATTCGTTG--GGGCACATCAGCGTCCACTC 918169
Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049
|||| | || || | || |||||| ||||||||||||||||| || |||| || ||
Sbjct 918170 GCCGTTCTTCTCCACACGCTTCATGAACAGGTCGGGGATCCAGAGTGCGAGGAAAAGATC 918229
Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109
| || | ||| ||| ||| |||||||| ||| || | || |||||||| ||
Sbjct 918230 ACGGGCACGGACCTCCTCCTTGCCTTGGTTCTTCCGCAGGTCGAGGAACTCAAAGACATC 918289
Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169
| | ||||| ||||||| ||||| || || ||||||||||||||||| ||||| ||
Sbjct 918290 GGCATGCCACGGCTCCAAGTAGATGCAGAATGCACCGGGCCGCTTGTTGCCACCCTGATC 918349
Query 245170 CAC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGC 245228
||| | | || | |||||||| || || | || | |||||||| || ||
Sbjct 918350 CACGTAGCGGGCCGTG-TTGTTGAAGACACGAAGCATGGGGATGATGCCGTTGGATGTGC 918408
Query 245229 CGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCT 245284
|||| ||||| ||||| | ||| | | | | ||| ||||||||| ||
Sbjct 918409 CGTTAGTGCCGGCAATGTAAGAGCCGGTAGCAC---GAATGC-GATGGACATTCAGACCG 918464
Query 245285 AGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCC 245344
| || || || ||||||||| | ||| || |||||| ||||| ||||||||
Sbjct 918465 ATGCCACCAGCCGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCCTCA 918524
Query 245345 ATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCAC 245404
||||| || |||||||| | || ||||||||||||||||| | || ||| |||
Sbjct 918525 ATGCTATCATCCTTCATGTCTACGAGGAAGCAGGAGGACAGCTGAGCCTGGGGCGTGCCG 918584
Query 245405 GAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTC 245464
| |||||| || || || ||| || |||||| | | |||| | | | ||| |||
Sbjct 918585 GCGTTGAAAAGCGTCGGCGAGGCATGCGTAAAGAACTTGTTCGACATGTAGTTGTATGTC 918644
Query 245465 TGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCAC-CTCATGAGGGTGTG 245523
| || | | || | | ||||| ||| | ||| ||| | ||| | ||||
Sbjct 918645 TCGACAACACGCTCCACATCATCGCCCCAGATACCAACGGC-CACGCGCATAATCATGTG 918703
Query 245524 CTGGGGCGTCT---CGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGT 245580
||| ||| || |||| || ||| | |||||| | |||||| ||||| || ||
Sbjct 918704 CTGCGGCCGCTCGACGATCTTACCATCGAG---CTTGAGGAGGTAGGACCGCTCCAGGGT 918760
Query 245581 CTTGAACCCAAAGTA 245595
|||||| ||||||||
Sbjct 918761 CTTGAAGCCAAAGTA 918775
>seq42
Length=705881
Score = 233 bits (258), Expect = 4e-56
Identities = 367/519 (71%), Gaps = 15/519 (3%)
Strand=Plus/Minus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692
||||||||| |||||||| |||||||| || |||||| | || | ||
Sbjct 321869 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGCGCTGGATTGCTGACAAGGAGTCCACC 321810
Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752
|| | || | || || || || | ||||| |||||||| |||||| |||||||||
Sbjct 321809 TTTGCGCAGCGCCTCGTGGCATTCGCTGCCGTTGAGGGCATTTTCTTCAGCGGCGCCTTC 321750
Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAACG 42810
| |||||||||||||||||| || ||| | |||||| || || || ||||| || |
Sbjct 321749 TCTTCCATCTTCTGGCTCAAGAAGC--GTGGCCTGATGCCTGGTCTGACTTTCTCCAATG 321692
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
| || || | | |||||||||||||| | |||||||||||||| |||||||| ||
Sbjct 321691 AGCTGATTTCCCGCGACGAGGGGCTGCACACCGACTTTGCCTGCCTGCTGTTCTC---CC 321635
Query 42871 ACCTCAGGCACAAGCCCTCG---AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGG 42927
|||| | |||| | | || ||| || | ||| || ||| || || || ||
Sbjct 321634 ACCT---GAACAACCGCCCGAGCAAGCAGATGATCCAGGACATTATTGTCGATGCTGTCA 321578
Query 42928 AGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCAC 42986
|||| ||| |||||||||| ||| || | ||| |||||| | ||| | ||||||||| |
Sbjct 321577 AGATTGAGCAGGAGTTCCTGACGGAGGCTCTG-CCGTGTGCTCTGCTGGGCATGAACTCC 321519
Query 42987 GACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTC 43046
||||||| ||||||| ||| || ||||||| ||| ||| | | || |
Sbjct 321518 ACCCTCATGAAGCAGTACATTGAGTTTGTTGCCGACCGTCTGCTGGTCGCCCTCGGCAAC 321459
Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106
| | ||| | | ||||||||||||||||||||||||||| ||| |||
Sbjct 321458 GACAAGGTGTACCGTTCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTGGGTGGC 321399
Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
||||||||||| || ||||||||||||| |||||||||
Sbjct 321398 AAGACCAACTTCTTTGAGAAGCGCGTCGGTGACTACCAG 321360
Score = 143 bits (158), Expect = 5e-29
Identities = 236/336 (70%), Gaps = 11/336 (3%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||| || ||| |||||| |||||||||||||| |||
Sbjct 322262 ATCTGGCAGATGTACAAGAAGCACGAGGCTTCCTTCTGGACGGCCGAGGAGATTGATCTG 322203
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAGTTTTTCCTCAAAA- 42417
|||||||| | || |||| | || | |||| |||| || |||| |||
Sbjct 322202 TCCAAGGACCTGCACGACTGGCACA-ACCGCCTGAACGACGACGAGCGTTTCTTCATCTC 322144
Query 42418 --ACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| || ||||||||||| |||||||| ||||| ||||| |||||||| | | |
Sbjct 322143 CCACATTCTCGCCTTCTTCGCTGCCTCTGATGGCATCGTCAACGAGAACCTCGTCGAGCG 322084
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| ||| |||||| ||||||||||| ||||||||||| ||
Sbjct 322083 CTTCAGCGCTGAGGTCCAGGTGCCTGAGGCTCGCTGCTTCTATGGCTTCCAGATCATGAT 322024
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|||||| | ||||| ||| |||| | ||||||| |||| |||||| ||| ||
Sbjct 322023 GGAGAACATCCACTCGGAGACGTACTC---TCTGCTCATTGACACCTACATCAAGGAGCC 321967
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628
| ||||| || || ||||| ||||| || ||
Sbjct 321966 CAAGGAGCGCGACCACCTTTTCAACGCCATTGATAC 321931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338692417680
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