Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq39 84.2 2e-11 >seq39 Length=779030 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 ||||||||||| |||| ||| || || || ||| ||||||| | || ||| ||| Sbjct 713619 ACATAAAATTGCGCAAACATGTGGCATGGGGGCAGCACCATCAATGGCAGGTCGTGCGGA 713678 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 |||||||| ||| | ||| | || |||| ||| | | | || | |||| Sbjct 713679 TTCCACGCTGACAACAGGATGCGTCGGTCGTACGGGGTTGTCTGTAGTTTGCGTACAACC 713738 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCC-ACGTACGCCGC 20535 | | || ||||| | ||||| || ||||||||||| | || |||| | ||| || Sbjct 713739 TCAGTTAACTGGTCGACGCCCTGCCCAGTATAGTCAGCGTGCG-GTCCTGCATACTGAGC 713797 Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583 || ||||||| ||||||||||||||| || || || | || ||||| Sbjct 713798 GCCGAAGTGCCGCCACTGGAAACCGTATACGGGACCGAGGTCGCCCTC 713845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372562762120