Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq39 84.2 2e-11
>seq39
Length=779030
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416
||||||||||| |||| ||| || || || ||| ||||||| | || ||| |||
Sbjct 713619 ACATAAAATTGCGCAAACATGTGGCATGGGGGCAGCACCATCAATGGCAGGTCGTGCGGA 713678
Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476
|||||||| ||| | ||| | || |||| ||| | | | || | ||||
Sbjct 713679 TTCCACGCTGACAACAGGATGCGTCGGTCGTACGGGGTTGTCTGTAGTTTGCGTACAACC 713738
Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCC-ACGTACGCCGC 20535
| | || ||||| | ||||| || ||||||||||| | || |||| | ||| ||
Sbjct 713739 TCAGTTAACTGGTCGACGCCCTGCCCAGTATAGTCAGCGTGCG-GTCCTGCATACTGAGC 713797
Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583
|| ||||||| ||||||||||||||| || || || | || |||||
Sbjct 713798 GCCGAAGTGCCGCCACTGGAAACCGTATACGGGACCGAGGTCGCCCTC 713845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441372562762120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |