Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq41 401 6e-107
>seq41
Length=3900177
Score = 401 bits (444), Expect = 6e-107
Identities = 1111/1671 (66%), Gaps = 38/1671 (2%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| || |||||| ||| |||||||||||| | |||||
Sbjct 918784 AACTACCAATACTTTGGCTTCAAGACCCTGGAGCGGTCCTACCTCCTCAAGCTCGATGGT 918725
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | | |||||| ||||| || || | |||||||| ||| | || || ||| |
Sbjct 918724 AAGATCGTCGAGCGGCCGCAGCACATGATTATGCGCGTGGCCGTTGGTATCTGGGGCGAT 918665
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893
|| || | |||| | | | | || ||||| | ||||| | ||| |||| |
Sbjct 918664 GATGTGGAGCGTGTTGTCGAGACATACAACTACATGTCGAACAAGTTCTTTACGCATG-C 918606
Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953
| | ||||| || |||||||| || || || | | ||| |||| || || ||||| |
Sbjct 918605 CTCGCCGACGCTTTTCAACGCCGGCACGCCCCAGGCTCAGCTGTCCTCCTGCTTCCTCGT 918546
Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
||| | |||| || ||| || || | ||||| |||||| ||||| | |
Sbjct 918545 AGAC-ATGAAGGATGATAGCATTGAGGGCATCTACGACACGCTCAAGACGTGTGCCATGA 918487
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
|||| || || || || ||||| | | |||||| | | ||||| | || || |
Sbjct 918486 TCTCCAAGACGGCTGGTGGCATCGGTCTGAATGTCCATCGCATTCGTGCTACCGGCTCTT 918427
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
|||| ||| || || ||||| ||||||||| || |||| ||||| || ||||||||||
Sbjct 918426 ACATTGCCGGCACTAACGGCACATCCAACGGCATCATCCCCATGCTTCGTGTCTTCAACA 918367
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| |||| ||||||||||| |||||||| | | || ||| | ||| ||||
Sbjct 918366 ACACGGCCCGCTACGTGGATCAGGGTGGCAACAAGCGGCCCGGTGCATTCTGCATCTACT 918307
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
| ||||| ||||| || || || | ||| |||||||||| |||||||| ||||| |
Sbjct 918306 TGGAGCCGTGGCATGCCGATGTCTTTGAGTTCCTCGACCTGCGGAAGAACCAAGGCAAGG 918247
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| || | ||| | || || ||| ||| |||||| | || ||||| || ||||| |
Sbjct 918246 AGGAGGTCCGTGCCCGTGATCTTTTCCTCGCACTCTGGATCCCCGACCTGTTCATGAAGC 918187
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| || ||||| ||| || |||| || | || ||||| ||||| |||| ||| | |
Sbjct 918186 GTGTGGAGAAGAACGGCGAGTGGACGCTGATGTGCCCCAACGAATGCGCCGGCCTGGCTG 918127
Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGG-CAAGGC 94430
| | || | ||||| | |||| | |||| | ||| |||| | ||
Sbjct 918126 ATTGCTACGGCGAGGAGTTTGAGGCTCTGTACGAGAAATACG-AGCGCGAGGGTCGCGGT 918068
Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490
| | ||| || | || |||||||||| || || |||| | ||| ||||||
Sbjct 918067 C-GCAAGAAGATCAAGGCCCAGAAGCTGTGGTATGCCATTCTGGAGGCGCAGACGGAGAC 918009
Query 94491 GGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549
||| | |||| ||| | | |||||| | ||| |||| |||| ||||||| || |||
Sbjct 918008 GGGCAACCCCTTCATGCTCTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAACC 917950
Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609
| || ||| |||||||| ||||||| |||||||||||||| | |||||||||
Sbjct 917949 TGGGTACCATCCGCAGCTCGAACTTGTGCACGGAGATTGTCGAGTACTCGGCTCCGGACG 917890
Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA-GATGCCTAC 94668
|| | |||||||| ||| ||| ||| | || | ||||||| ||| || | ||
Sbjct 917889 AGGTGGCTGTGTGCAACTTGGCCTCTTTGGCTCTTCCGTCTTTCGT-CGACTATAACAAC 917831
Query 94669 ACGTC-TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT 94727
||| || |||| || ||| | || ||| | ||| | | | |||
Sbjct 917830 GAGTCGTATGACTTCCAGAGA-CTGCACGA---TGTCA----CGCAG--CTGGTTGTCCG 917781
Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787
||||||||| | | || || |||| |||||| || || || || |||| ||
Sbjct 917780 CAACCTGAACCGCATCATTGATGTCAACTACTACCCTGTGCCAGAAGCACGGAACAGTAA 917721
Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847
| || || || ||||| || | || || |||||| | |||||||| | || | |
Sbjct 917720 CATGCGCCACCGTCCCATTGGTCTGGGTGTGCAGGGTCTGGCGGACGCCTTCCTGGCGCT 917661
Query 94848 GCGTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906
||| |||||| || ||| ||| || || | |||| | | | || || | ||
Sbjct 917660 GCGCATGCCCTTTGAGTCTCCCGAGGCACGCCTG-CTGAACAAGCAGGTCTTTGAGACCA 917602
Query 94907 TTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCC-AGATCGGACGGCGGGCCACAC 94965
| || ||| ||| ||| | || | | ||||| |||| || ||| | ||
Sbjct 917601 TCTACCACGCGGCGCTGACGGAGTCGTGCGAGCTGGCCAAGAT-TGAGGGC---ACCTAC 917546
Query 94966 GAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTG 95025
| | | || || || || ||||| ||| | ||| |||| | |||| |||
Sbjct 917545 CAGACATATGAGGGGTCTCCTGTGTCGCAGGGTATTCTGCAGCCCGACATGTGGGATGTC 917486
Query 95026 AAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCA---AACACGGT 95082
| ||| |||| |||| || ||||| | || || ||||| | |||| | ||||||
Sbjct 917485 ACGCCATCGGACCTGTGGGATTGGGACTCGCTGCG-GCTGAAG--ATCAAGGAGCACGGT 917429
Query 95083 GTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGC 95142
||| ||| ||||| ||||| || ||||| ||||| || ||| | ||||| || |||
Sbjct 917428 GTGCGCAACAGTCTGCTGGTGGCGCCGATGCCGACGGCGTCGACGTCACAGATTCTGGGC 917369
Query 95143 AACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGG 95202
|||||||||| ||||| || | ||| |||||| | ||| |||| ||||| |||||
Sbjct 917368 AACAACGAGTGCTTCGAGCCGTACACATCCAACATTTACTCGCGGCGTGTGCTGGCCGGT 917309
Query 95203 GAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGG 95261
|| |||| || ||||| | || || |||||| | || | ||||| |||||
Sbjct 917308 GAGTTCCAGGTGGTCAACCCGTGGCTGCTCAAGGACCTGGTCGAC-ATGGGTCTGTGGTC 917250
Query 95262 TGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAAT 95321
||||| | ||||||| | | || ||||| || |||||||||| || | ||
Sbjct 917249 GGACAACATGAAGAACCGCATCATTGCCGAGAACGGTTCGATCCAGAACATTCCCAACAT 917190
Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|||| ||||||||||| || |||||||| |||||||||||| | |||||
Sbjct 917189 CCCGGCAGACATCAAGGCTCTGTACAAGACGGTGTGGGAGATCTCTCAGCG 917139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722934086280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |