Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq41 354 2e-92 seq42 183 6e-41 >seq41 Length=3900177 Score = 354 bits (392), Expect = 2e-92 Identities = 1145/1744 (66%), Gaps = 70/1744 (4%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 ||||| ||||| | || | || ||||||| ||||| || ||||||||||| ||||| Sbjct 916950 ACCGTGAACTGGATCGGCTGTGCGGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTCTTC 917009 Query 212613 AGGCCCTTGCCCCAGCC-GTGCATGTGCATTGCT-GTGAGTTTCTTCAGCTTAATATTCT 212670 |||||| |||||| ||| | |||||| ||| |||| |||| | || || Sbjct 917010 AGGCCCAGCTTCCAGCCCGTGAA-GTGCAT-GCTCGTGA---TCTTGCCC---ATGGTCG 917061 Query 212671 GGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCC 212730 | ||| | |||| | |||||| ||||| |||||| || || | | | Sbjct 917062 GCTCACGCATGTGG---------ATGTTCAGCGACTGCGACTGGTCGATAAAGGCACCAC 917112 Query 212731 TGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTT 212790 ||| || ||||| | | || | ||| |||| ||||||||| |||||| | | Sbjct 917113 GGTCCGCAGCCATCTGCACAATCGTCCGCTGAGAGATCTCCCACACCGTCTTGTACAGAG 917172 Query 212791 CTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA--G 212848 | |||| ||| | |||| | ||| |||||||| | || || || | | | || | Sbjct 917173 CCTTGATGTCTGCCGGGATGTTGGGAATGTTCTGGATCGAACC---GT-TCTCGGCAATG 917228 Query 212849 CTGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGA 212906 ||| | ||||| || ||| || ||| || ||||| ||||| ||| Sbjct 917229 ATGCGGTTCTTCATGTTGTCCGACCACAGACCCATGTCGACCAGGTCCTTGAGCAGCCAC 917288 Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| ||||| | ||||| | || | ||||| ||| || ||||| Sbjct 917289 GGGTTGACCACCTGGAACTCACCGGCCAGCACACGCCGCGAGTAAATGTTGGATGTGTAC 917348 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| || ||||||||| ||||||||||||| || || || ||||| || ||| Sbjct 917349 GGCTCGAAGCACTCGTTGTTGCCCAGAATCTGTGACGTCGACGCCGTCGGCATCGGCGCC 917408 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 ||||| |||||||| | ||| |||||||| ||| |||| ||| |||| ||| Sbjct 917409 ACCAGCAGACTGTTGCGCACACCGTGCTCCTTGATCTTCAGCCGCAGCGAGTCCCAATCC 917468 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || ||||||| | | || | ||||||||| ||||| || || | Sbjct 917469 CA---------CAGGTCCGATGGCGTGACATCCCACATGTCGGGCTGCAGAATACCCTGC 917519 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 ||| || |||| || | ||||| ||| | ||||||||||||||| ||| Sbjct 917520 GACACAGGAGACCCCTCATATGTCTGGTAGGTGCCCTCAATCTTGGCCAGCTCGCACGAC 917579 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 || ||| || |||| ||||||||| ||||| | || | |||| ||| ||||| Sbjct 917580 TCCGTCAGCGCCGCGTGGTAGATGGTCTCAAAGACCTGCTTGTTCAGCAGGCGTGCCTCG 917639 Query 213267 GGGGACGTGAAGGGCATCATCATGCGTT-GGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 || ||| |||||||| || ||| |||| | || ||||| ||||| || || | Sbjct 917640 GGAGACTCAAAGGGCATGCGCA-GCGCCAGGAAGGCGTCCGCCAGACCCTGCACACCCAG 917698 Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTC-CAAGGGGTAAAAGTTGC 213384 || ||||| | ||| | || |||| || | || || || ||||| ||||| Sbjct 917699 ACCAATGGGACGGTGGCGCATGTTACTGTTCC-GTGCTTCTGGCACAGGGTAGTAGTTGA 917757 Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG- 213443 || ||||| ||| ||||||||| ||| | ||||||| | ||| || | Sbjct 917758 CATCAATGATGCGGTTCAGGTTGCGGACAACCAGCTGCGTGACATCGTGCAGTCTCTGGA 917817 Query 213444 --TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGT 213501 | || || ||| | ||| | | || || || || | ||||| || Sbjct 917818 AGTCATACGACTCGTTGTTATAGTCGACGAAAGAC---GGAAGAGCCAAAGAGGCCAAGT 917874 Query 213502 TGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGC 213561 |||| || |||||||| | | | | |||||| | ||||| ||||||| ||| || Sbjct 917875 TGCACACAGCCACCTCGTCCGGAGCCGAGTACTCGACAATCTCCGTGCACAAGTTCGAGC 917934 Query 213562 ATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTGTAGAGC 213620 |||||||| |||||||||| ||||| ||| ||| | |||| |||||||||||| Sbjct 917935 TGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGGTCCTTGTAGAGC 917993 Query 213621 ATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGG 213678 ||| ||||| || ||||| ||| | | |||| || ||| ||| || | | || Sbjct 917994 ATGAAGGGGTTGCCCGTCTCCGTCTGCGCCTCCAGAAT--GGCATACCACAGCTTCTGGG 918051 Query 213679 CCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTG 213737 |||||| | | | ||| || | | | || |||||| | ||||| || | | Sbjct 918052 CCTTGATCTTCTTGC-GACCGCGAC---CCTCGCGCTCGTATTTCTCGTACAGAGCCTCA 918107 Query 213738 AATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCA 213796 || || | ||| || | | | |||| || | || ||| ||||| || |||| Sbjct 918108 AACTCCTCGCCGTAGCAATCAG-CCAGGCCGGCGCATTCGTTGGGGCACATCAGCGTCCA 918166 Query 213797 GTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACA 213855 || |||| | |||| || | || |||||||||||| |||| ||| || ||| ||| | Sbjct 918167 CTCGCCGTTCTTCTCC-ACACGCTTCATGAACAGGTCGGGGATCCAGAGTGCGAGGAAAA 918225 Query 213856 GGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGA 213915 | || | || | ||| ||| || ||| || ||||| || || || ||||||| Sbjct 918226 GATCACGGGCACGGACCTCCTCCTTGCCTTGGTTCTTCCGCAGGTCGAGGAACTCAAAGA 918285 Query 213916 TGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCT 213972 || || ||||||||||||| ||||||| || || || |||| | ||||| |||| Sbjct 918286 CATCGGCATGCCACGGCTCCAAGTAGATGCAGAATGCACCGGGCCGCTTGTTGCCACCCT 918345 Query 213973 GGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACT 214032 | ||||| | |||| ||||||||| || || | ||| | | |||||||| | Sbjct 918346 GATCCACGTAGCGGGCCGTGTTGTTGAAGACACGAAGCATGGGGATGATGCCGTTGGA-T 918404 Query 214033 GT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCC 214089 || ||||| || || || || || ||||||| || | | | || ||| ||| | Sbjct 918405 GTGCCGTTAGTGCCGGCAATGTAAGAGCCGGTAGCACGAATGCGATGGACATTCAGA--C 918462 Query 214090 CTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGG 214149 | |||||||| || ||||||||||||||| || | | | || || |||||| Sbjct 918463 CGATGCCACCAGCCGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCCT 918522 Query 214150 CCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGC 214209 | ||||| ||||| | | || | | ||||||| || ||||| | | || || || Sbjct 918523 CAATGCTATCATCCTTCATGTCTACGAGGAAGCAGGAGGACAGCTGAGCCTGGGGCGTGC 918582 Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGG 214269 | | |||||||||||| || |||||| | | |||||||| || | | |||| | Sbjct 918583 CGGCGTTGAAAAGCGTCGGCGAGGCATGCGTAAAGAACTTGTTCGACATGTAGTTGTATG 918642 Query 214270 TCTC 214273 |||| Sbjct 918643 TCTC 918646 >seq42 Length=705881 Score = 183 bits (202), Expect = 6e-41 Identities = 358/520 (69%), Gaps = 17/520 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | |||||||||||||| ||||| || ||| ||||||||||| Sbjct 321360 CTGGTAGTCACCGACGCGCTTCTCAAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTC 321419 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||| ||| ||||||||||| | |||||| |||| ||| | |||||| Sbjct 321420 CATAAAGTCGAAGGGGTTGGTGGAACGGTACACCT-TGTCGTTGCCGAGGGCGACCAGCA 321478 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || || || |||| ||||| | |||||||||| ||||||||| | || | Sbjct 321479 GACGGTCGGCAACAAACTCAATGTACTGCTTCATGAGGGTGGAGTTCATGCCCAGCAGAG 321538 Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 |||||| || ||||| || || ||||||| ||| |||| || || || | | ||| Sbjct 321539 CACACGG-CAGAGCCTCCGTCAGGAACTCCTGCTCAATCTTGACAGCATCGACAATAATG 321597 Query 48077 TGCTTAAC-----GCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131 | || | || | ||| | |||| ||| |||||| || | |||| || Sbjct 321598 TCCTGGATCATCTGCTTG-CTCGGGCGGTT-GTT---CAGGTG---GGAGAACAGCAGGC 321649 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 |||||||||| |||||| || ||||| ||| || ||| | |||||||| |||| Sbjct 321650 AGGCAAAGTCGGTGTGCAGCCCCTCGTCGCGGGAAATCAGCTCATTGGAGAAAGTCAGAC 321709 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||||||| | || | || ||||||||||| || | | ||| | ||| |||||| | Sbjct 321710 CAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAAGAGAAGGCGCCGCTGAAGAAAA 321769 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 ||||||| || || ||||| || ||| | || | || | | | |||||| | | Sbjct 321770 TGCCCTCAACGGCAGCGAATGCCACGAGGCGCTGCGCAAAGGTGGACTCCTTGTCAGCAA 321829 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| || |||||||| |||||||| |||||| || Sbjct 321830 TCCAGCGCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGG 321869 Score = 87.8 bits (96), Expect = 3e-12 Identities = 175/256 (68%), Gaps = 5/256 (2%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||| |||| ||||| | ||||| || ||||||||| || |||||| | ||||| Sbjct 321999 GTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCAGCGAGCCTC 322058 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | |||||| || || | | ||| | ||| | || ||||| ||||| || ||||| || Sbjct 322059 AGGCACCTGGACCTCAGCGCTGAAGCGCTCGACGAGGTTCTCGTTGACGATGCCATCAGA 322118 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 ||||| |||||||| || | || | ||| ||||||| || | | || || Sbjct 322119 GGCAGCGAAGAAGGCGAGAATGTGGGAGATGAAGAAACGCTCGTCGTCGTTCAGGCGGTT 322178 Query 48604 ---CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG-CGA 48659 |||| | || | ||| ||| ||| || | || || | ||||||||||| | | Sbjct 322179 GTGCCAGTCGTGCAGGTCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAGGAAGCCTC 322238 Query 48660 GTGCTTTTTTGTACAT 48675 |||| || |||||||| Sbjct 322239 GTGC-TTCTTGTACAT 322253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532299301120