Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq41 354 2e-92
seq42 183 6e-41
>seq41
Length=3900177
Score = 354 bits (392), Expect = 2e-92
Identities = 1145/1744 (66%), Gaps = 70/1744 (4%)
Strand=Plus/Plus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
||||| ||||| | || | || ||||||| ||||| || ||||||||||| |||||
Sbjct 916950 ACCGTGAACTGGATCGGCTGTGCGGCAGCCTGCGTGCGCAGGTAGTACATGCCCGTCTTC 917009
Query 212613 AGGCCCTTGCCCCAGCC-GTGCATGTGCATTGCT-GTGAGTTTCTTCAGCTTAATATTCT 212670
|||||| |||||| ||| | |||||| ||| |||| |||| | || ||
Sbjct 917010 AGGCCCAGCTTCCAGCCCGTGAA-GTGCAT-GCTCGTGA---TCTTGCCC---ATGGTCG 917061
Query 212671 GGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCC 212730
| ||| | |||| | |||||| ||||| |||||| || || | | |
Sbjct 917062 GCTCACGCATGTGG---------ATGTTCAGCGACTGCGACTGGTCGATAAAGGCACCAC 917112
Query 212731 TGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTT 212790
||| || ||||| | | || | ||| |||| ||||||||| |||||| | |
Sbjct 917113 GGTCCGCAGCCATCTGCACAATCGTCCGCTGAGAGATCTCCCACACCGTCTTGTACAGAG 917172
Query 212791 CTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA--G 212848
| |||| ||| | |||| | ||| |||||||| | || || || | | | || |
Sbjct 917173 CCTTGATGTCTGCCGGGATGTTGGGAATGTTCTGGATCGAACC---GT-TCTCGGCAATG 917228
Query 212849 CTGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGA 212906
||| | ||||| || ||| || ||| || ||||| ||||| |||
Sbjct 917229 ATGCGGTTCTTCATGTTGTCCGACCACAGACCCATGTCGACCAGGTCCTTGAGCAGCCAC 917288
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
|||||||| | |||||| ||||| | ||||| | || | ||||| ||| || |||||
Sbjct 917289 GGGTTGACCACCTGGAACTCACCGGCCAGCACACGCCGCGAGTAAATGTTGGATGTGTAC 917348
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
||||||| || ||||||||| ||||||||||||| || || || ||||| || |||
Sbjct 917349 GGCTCGAAGCACTCGTTGTTGCCCAGAATCTGTGACGTCGACGCCGTCGGCATCGGCGCC 917408
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086
||||| |||||||| | ||| |||||||| ||| |||| ||| |||| |||
Sbjct 917409 ACCAGCAGACTGTTGCGCACACCGTGCTCCTTGATCTTCAGCCGCAGCGAGTCCCAATCC 917468
Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146
|| ||||||| | | || | ||||||||| ||||| || || |
Sbjct 917469 CA---------CAGGTCCGATGGCGTGACATCCCACATGTCGGGCTGCAGAATACCCTGC 917519
Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206
||| || |||| || | ||||| ||| | ||||||||||||||| |||
Sbjct 917520 GACACAGGAGACCCCTCATATGTCTGGTAGGTGCCCTCAATCTTGGCCAGCTCGCACGAC 917579
Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266
|| ||| || |||| ||||||||| ||||| | || | |||| ||| |||||
Sbjct 917580 TCCGTCAGCGCCGCGTGGTAGATGGTCTCAAAGACCTGCTTGTTCAGCAGGCGTGCCTCG 917639
Query 213267 GGGGACGTGAAGGGCATCATCATGCGTT-GGAACACATCAGCCAGCCCCTGGACCCCGAT 213325
|| ||| |||||||| || ||| |||| | || ||||| ||||| || || |
Sbjct 917640 GGAGACTCAAAGGGCATGCGCA-GCGCCAGGAAGGCGTCCGCCAGACCCTGCACACCCAG 917698
Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTC-CAAGGGGTAAAAGTTGC 213384
|| ||||| | ||| | || |||| || | || || || ||||| |||||
Sbjct 917699 ACCAATGGGACGGTGGCGCATGTTACTGTTCC-GTGCTTCTGGCACAGGGTAGTAGTTGA 917757
Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG- 213443
|| ||||| ||| ||||||||| ||| | ||||||| | ||| || |
Sbjct 917758 CATCAATGATGCGGTTCAGGTTGCGGACAACCAGCTGCGTGACATCGTGCAGTCTCTGGA 917817
Query 213444 --TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGT 213501
| || || ||| | ||| | | || || || || | ||||| ||
Sbjct 917818 AGTCATACGACTCGTTGTTATAGTCGACGAAAGAC---GGAAGAGCCAAAGAGGCCAAGT 917874
Query 213502 TGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGC 213561
|||| || |||||||| | | | | |||||| | ||||| ||||||| ||| ||
Sbjct 917875 TGCACACAGCCACCTCGTCCGGAGCCGAGTACTCGACAATCTCCGTGCACAAGTTCGAGC 917934
Query 213562 ATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTGTAGAGC 213620
|||||||| |||||||||| ||||| ||| ||| | |||| ||||||||||||
Sbjct 917935 TGCGGATGGTACCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGGTCCTTGTAGAGC 917993
Query 213621 ATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGG 213678
||| ||||| || ||||| ||| | | |||| || ||| ||| || | | ||
Sbjct 917994 ATGAAGGGGTTGCCCGTCTCCGTCTGCGCCTCCAGAAT--GGCATACCACAGCTTCTGGG 918051
Query 213679 CCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTG 213737
|||||| | | | ||| || | | | || |||||| | ||||| || | |
Sbjct 918052 CCTTGATCTTCTTGC-GACCGCGAC---CCTCGCGCTCGTATTTCTCGTACAGAGCCTCA 918107
Query 213738 AATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCA 213796
|| || | ||| || | | | |||| || | || ||| ||||| || ||||
Sbjct 918108 AACTCCTCGCCGTAGCAATCAG-CCAGGCCGGCGCATTCGTTGGGGCACATCAGCGTCCA 918166
Query 213797 GTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACA 213855
|| |||| | |||| || | || |||||||||||| |||| ||| || ||| ||| |
Sbjct 918167 CTCGCCGTTCTTCTCC-ACACGCTTCATGAACAGGTCGGGGATCCAGAGTGCGAGGAAAA 918225
Query 213856 GGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGA 213915
| || | || | ||| ||| || ||| || ||||| || || || |||||||
Sbjct 918226 GATCACGGGCACGGACCTCCTCCTTGCCTTGGTTCTTCCGCAGGTCGAGGAACTCAAAGA 918285
Query 213916 TGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCT 213972
|| || ||||||||||||| ||||||| || || || |||| | ||||| ||||
Sbjct 918286 CATCGGCATGCCACGGCTCCAAGTAGATGCAGAATGCACCGGGCCGCTTGTTGCCACCCT 918345
Query 213973 GGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACT 214032
| ||||| | |||| ||||||||| || || | ||| | | |||||||| |
Sbjct 918346 GATCCACGTAGCGGGCCGTGTTGTTGAAGACACGAAGCATGGGGATGATGCCGTTGGA-T 918404
Query 214033 GT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCC 214089
|| ||||| || || || || || ||||||| || | | | || ||| ||| |
Sbjct 918405 GTGCCGTTAGTGCCGGCAATGTAAGAGCCGGTAGCACGAATGCGATGGACATTCAGA--C 918462
Query 214090 CTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGG 214149
| |||||||| || ||||||||||||||| || | | | || || ||||||
Sbjct 918463 CGATGCCACCAGCCGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCCCT 918522
Query 214150 CCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGC 214209
| ||||| ||||| | | || | | ||||||| || ||||| | | || || ||
Sbjct 918523 CAATGCTATCATCCTTCATGTCTACGAGGAAGCAGGAGGACAGCTGAGCCTGGGGCGTGC 918582
Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGG 214269
| | |||||||||||| || |||||| | | |||||||| || | | |||| |
Sbjct 918583 CGGCGTTGAAAAGCGTCGGCGAGGCATGCGTAAAGAACTTGTTCGACATGTAGTTGTATG 918642
Query 214270 TCTC 214273
||||
Sbjct 918643 TCTC 918646
>seq42
Length=705881
Score = 183 bits (202), Expect = 6e-41
Identities = 358/520 (69%), Gaps = 17/520 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | |||||||||||||| ||||| || ||| |||||||||||
Sbjct 321360 CTGGTAGTCACCGACGCGCTTCTCAAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTC 321419
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||| ||| ||||||||||| | |||||| |||| ||| | ||||||
Sbjct 321420 CATAAAGTCGAAGGGGTTGGTGGAACGGTACACCT-TGTCGTTGCCGAGGGCGACCAGCA 321478
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| | || || || |||| ||||| | |||||||||| ||||||||| | || |
Sbjct 321479 GACGGTCGGCAACAAACTCAATGTACTGCTTCATGAGGGTGGAGTTCATGCCCAGCAGAG 321538
Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
|||||| || ||||| || || ||||||| ||| |||| || || || | | |||
Sbjct 321539 CACACGG-CAGAGCCTCCGTCAGGAACTCCTGCTCAATCTTGACAGCATCGACAATAATG 321597
Query 48077 TGCTTAAC-----GCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131
| || | || | ||| | |||| ||| |||||| || | |||| ||
Sbjct 321598 TCCTGGATCATCTGCTTG-CTCGGGCGGTT-GTT---CAGGTG---GGAGAACAGCAGGC 321649
Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191
|||||||||| |||||| || ||||| ||| || ||| | |||||||| ||||
Sbjct 321650 AGGCAAAGTCGGTGTGCAGCCCCTCGTCGCGGGAAATCAGCTCATTGGAGAAAGTCAGAC 321709
Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251
||||||| | || | || ||||||||||| || | | ||| | ||| |||||| |
Sbjct 321710 CAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAAGAGAAGGCGCCGCTGAAGAAAA 321769
Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311
||||||| || || ||||| || ||| | || | || | | | |||||| | |
Sbjct 321770 TGCCCTCAACGGCAGCGAATGCCACGAGGCGCTGCGCAAAGGTGGACTCCTTGTCAGCAA 321829
Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
||||| || |||||||| |||||||| |||||| ||
Sbjct 321830 TCCAGCGCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGG 321869
Score = 87.8 bits (96), Expect = 3e-12
Identities = 175/256 (68%), Gaps = 5/256 (2%)
Strand=Plus/Plus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
|||| |||| ||||| | ||||| || ||||||||| || |||||| | |||||
Sbjct 321999 GTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCAGCGAGCCTC 322058
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543
| |||||| || || | | ||| | ||| | || ||||| ||||| || ||||| ||
Sbjct 322059 AGGCACCTGGACCTCAGCGCTGAAGCGCTCGACGAGGTTCTCGTTGACGATGCCATCAGA 322118
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603
||||| |||||||| || | || | ||| ||||||| || | | || ||
Sbjct 322119 GGCAGCGAAGAAGGCGAGAATGTGGGAGATGAAGAAACGCTCGTCGTCGTTCAGGCGGTT 322178
Query 48604 ---CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG-CGA 48659
|||| | || | ||| ||| ||| || | || || | ||||||||||| | |
Sbjct 322179 GTGCCAGTCGTGCAGGTCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAGGAAGCCTC 322238
Query 48660 GTGCTTTTTTGTACAT 48675
|||| || ||||||||
Sbjct 322239 GTGC-TTCTTGTACAT 322253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532299301120
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