Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq41 196 6e-44 seq4 161 1e-33 seq38 134 2e-25 seq42 125 9e-23 seq11 120 4e-21 seq40 104 3e-16 seq43 96.9 4e-14 >seq41 Length=3900177 Score = 196 bits (216), Expect = 6e-44 Identities = 316/450 (70%), Gaps = 21/450 (5%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||| || |||||||| ||||||| ||| ||||| || |||||||| | || ||||||||| Sbjct 918344 CTGATCCACGTAGCGGGCCGTGTTGTTGAAGACACGAAGCATGGGGATGATGCCGTTGGA 918403 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAA--AG 1630182 |||||| ||||| || | ||| | ||||| || || | || | | || || Sbjct 918404 TGTGCCGTTAGTGCCGGCAATGTAAGAGCCGGTAGCACGAA---TGCGATGGACATTCAG 918460 Query 1630183 -CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 |||||||| || |||| ||||||||| | || ||| |||||||||||||||||||| Sbjct 918461 ACCGATGCCACCAGCCGTCTTGGAGATCATGGCACACGTCTTGAGCGTGTCGTAGATGCC 918520 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 ||| || || |||||||||| ||||| ||||| || || || | || | ||| Sbjct 918521 CTCAATGCTATCATCCTTCATGTCTACGAGGAAGCAGGAGGACAGCTGAGCCTGGGGCGT 918580 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361 |||||||||||| ||||| |||| || || || |||| ||||||| || ||| Sbjct 918581 GCCGGCGTTGAAAAGCGTCGGCGAGGCATGCGTAAAGAACTTGTTCGACATGTAGTTGTA 918640 Query 1630362 GGTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGC 1630421 || ||| || ||| ||| |||| || || ||| || || | ||| Sbjct 918641 TGTCTCGACAACACGCTCCA---CATCATC-------GC---CCC--AGATACCAACGGC 918685 Query 1630422 GACGCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTA 1630481 |||||||| | ||||| ||| ||||||||||||| || | |||| ||||| Sbjct 918686 CACGCGCATAATCATGTGCTGCGGCCGCTCGACGATCTTACCATCGAGCTTGAGGAGGTA 918745 Query 1630482 GGACCGGCGCATGGTCATGAGGCCAAAGTA 1630511 |||||| || |||| ||| ||||||||| Sbjct 918746 GGACCGCTCCAGGGTCTTGAAGCCAAAGTA 918775 Score = 129 bits (142), Expect = 7e-24 Identities = 94/109 (86%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | || |||||| || |||||| |||| |||||| |||| |||||| Sbjct 97395 GCTGCAAACTACATGGATATCAAGAGCCTTCTCGATGTTGGCTGCAAGACTGTTGCCAAC 97454 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 97455 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACGTTTAACATCA 97503 Score = 93.3 bits (102), Expect = 5e-13 Identities = 269/414 (65%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGT-CG--TCGTACCCAGGTTCTGCTGGT 1628218 ||| ||| ||||| ||||||| ||| ||| | || | ||||||||||||| ||||| Sbjct 917905 ACTCGACAATCTCCGTGCACAAGTT---CGAGCTGCGGATGGTACCCAGGTTCTTCTGGT 917961 Query 1628219 TGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCG 1628278 || | | ||||| | |||||||| ||||||| |||| ||| ||||| |||||| Sbjct 917962 TGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCCGTCTGCG 918021 Query 1628279 CCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGCCCT 1628335 || | | ||||| |||| | || | || | || || ||| |||| |||| Sbjct 918022 CCTCCAGAATGGCATACCACAGCTTCTGGGC---CTTGATCTTCTTGCGACCGCGACCCT 918078 Query 1628336 NNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGG 1628395 ||||| || |||||||||| || |||||||| Sbjct 918079 CGCGCTCGTATTTCTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAATCAGCCAGGCCGG 918138 Query 1628396 GCGCCT-CGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAG 1628454 ||| | || || || | |||| ||| ||||| || || | || ||| || Sbjct 918139 -CGCATTCGTTGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCCACACGCTTCATGAAC 918197 Query 1628455 AGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGG 1628514 ||||| |||| |||||| || || || || || ||| |||||||||||| ||| Sbjct 918198 AGGTCGGGGATCCAGAGTGCGAGGAAAAGATCACGGGCACGGACCTCCTCCTTGCCTTGG 918257 Query 1628515 TTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAG 1628568 ||||| |||||||| | || | | ||||| ||||||||||||| |||| Sbjct 918258 TTCTTCCGCAGGTCGAGGAACTCAAAGACATCGGCATGCCACGGCTCCAAGTAG 918311 Score = 91.5 bits (100), Expect = 2e-12 Identities = 168/238 (71%), Gaps = 20/238 (8%) Strand=Plus/Plus Query 507598 GGTCGAGCGCCACCTGCGCGCGGGCGACGCCGTGGTGATGAACCGGCAGCCGTCGCTGCA 507657 ||| || || |||||| | |||||| ||| || | |||||||||||||||||||| Sbjct 231716 GGTGGACCGGCACCTGGAAGATGGCGACATTGTGCTGTTCAACCGGCAGCCGTCGCTGCA 231775 Query 507658 CA---TGGGCTCCATGCTCATGCACAAGGT---GGTGCCCATGCCCGGGCGCACCATGCG 507711 || || | |||| || ||| ||| ||||| || | |||| || | || Sbjct 231776 CAAGCTGAGTATCATG-TC--GCATCTGGTCAAGGTGCG---GCACTGGCGGACGTTCCG 231829 Query 507712 ATTCAACCTGGCCGTCACGGGCACC---TACAACGCCGACTTTGACGGCGACGAGATGAA 507768 ||||| | || | |||| ||||| |||||||||||||||||||||||||| Sbjct 231830 GCTCAACGAGTGTGT---GTGCACGCCATACAATGCCGACTTTGACGGCGACGAGATGAA 231886 Query 507769 CCTGCACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACGCACAC-CATGAGCGT 507825 | |||| ||||| ||| |||| ||| ||||| |||| |||| |||| ||| |||| Sbjct 231887 CTTGCATGTGCCGCAGACCGAAGAGGCACGCGCAGAGGCGACG-ACACTGATGGGCGT 231943 >seq4 Length=1274338 Score = 161 bits (178), Expect = 1e-33 Identities = 271/390 (69%), Gaps = 8/390 (2%) Strand=Plus/Minus Query 18100 GGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCA 18159 |||||||||||| | ||||||||||||| |||| ||||||||||| || | | Sbjct 456753 GGCGAGTCGCACTGCCGCTCCGTCGGCTGCATCGTCGATGGCGTGCCGCCCGGCCTCGCC 456694 Query 18160 CTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGG-GCGCACT 18218 || | ||||| || |||||||| ||| |||| || || || ||||| ||| | ||| | Sbjct 456693 CTCACGGAGGCGGATATCCAGCCCCAGATGGACCGTCGGCGGCCGGGTCAGTCGAGCA-T 456635 Query 18219 TTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCT 18278 | ||||| ||||||||| || || ||| |||||||||||||| ||| |||| | Sbjct 456634 CACGACGCCCCGCAACGAGGAGGACCGTGTCGAGATCCAGTCGGGCACCGAGTTCGGCGT 456575 Query 18279 CACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338 ||| ||||| | |||||||||||| || |||| |||||||||||| ||||| Sbjct 456574 CACTCTCGGAACCCCCGTCGGCCTCCGCGTCCTCAACAAGGACCAGCGGCCCAAGGACTA 456515 Query 18339 T------TCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCTACATGGC 18392 | || || | | | || || ||| || || |||| |||||| ||| Sbjct 456514 TGGCGGAGCCACCACGGACCGCTTCCCTCGTCCCAGCCATGCTGACTGGACCTACCTGGA 456455 Query 18393 CAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCAT 18452 ||||||||| ||||||| || || ||||| ||||||||||||| | Sbjct 456454 GAAGTACGGCGTCAAGGCCAGCAGCGGTGGCGGCCGCAGCAGTGCCCGCGAGACCATTGG 456395 Query 18453 GCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 ||||| || |||||||| | || ||||| Sbjct 456394 CCGCGTGGCTGCCGGCGCCATTGCTGAGAA 456365 Score = 127 bits (140), Expect = 2e-23 Identities = 111/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||||||||||||||| || || || ||||| | ||| | |||||||||||| Sbjct 456162 GACAGCATCGGCGGCACGGTCACCTGTGTCATCCGCAATGCCCCGCCCGGCCTCGGCGAG 456103 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| ||||||| ||| ||||||||||||||| ||||| |||||| Sbjct 456102 CCCTGCTTCGACAAGCTCGAGGCTCTGCTGGCCCACGCCATGCTGAGCATCCCTGCCACC 456043 Query 19167 AAGGGATTCGAGATTGGC 19184 ||||| || || || ||| Sbjct 456042 AAGGGCTTTGAAATCGGC 456025 >seq38 Length=4042462 Score = 134 bits (148), Expect = 2e-25 Identities = 317/468 (68%), Gaps = 13/468 (3%) Strand=Plus/Minus Query 1726692 GGGCGGCGGC-GCGC--ACGGCGTCGAGTGCCGTCGCC-ACGCTCCCGTCGGTGCCGTTC 1726747 ||||||| || |||| | |||||| | || || | || | | | ||||||||||||||| Sbjct 3026055 GGGCGGCAGCAGCGCCGATGGCGTCAA-TGGCGACACCCAGGTTGCCGTCGGTGCCGTTC 3025997 Query 1726748 TTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTC 1726807 |||||||||| | | | ||| |||| |||| ||| ||||||| ||||||||| || Sbjct 3025996 TTGAAGCCGACAGGGAAGGACAGGCCCGAAGCCAGCTCCCGGTGCAGCTGGCTCTCCGTG 3025937 Query 1726808 GTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAAGG-GGCCACCAGAGG 1726866 ||||| ||||| | ||| || || | | ||| |||| | | ||| | | | Sbjct 3025936 GTGCGTGCGCCAATGGCACCGACCGAGATGAAGTCGGCCAGGAACTGCGGCGAGATGGTG 3025877 Query 1726867 ACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGGCG 1726926 | ||| | |||| ||| | ||| || | | | | ||||||| || || | Sbjct 3025876 TC-GAGCATCTCGCTGGCAATAGGCA---CGCCAGAGCTGGTCAGATCGCAGAAGAGCTG 3025821 Query 1726927 GCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGGC 1726986 ||| ||| || |||||| | | | | | | | ||||| ||| |||||| || Sbjct 3025820 GCGTGACACCCGCAGGCCCTTGTTGATCTTGAAGGTCGAGTCGATGTCCGGGTCGTTGAT 3025761 Query 1726987 CAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACGCA 1727046 |||||||||||| || || ||||| |||||||| |||| ||||||||||||| | | Sbjct 3025760 CAGGCCCTTCCAGCCAACCGTCGTCCGCGGCTTCTCGAGGTAGGCGCGCATGATGATGAC 3025701 Query 1727047 AAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGCGTCGGCCATAGTCGACGAC 1727106 || ||| ||| ||||| || | | | ||||| || | | || || ||| | Sbjct 3025700 CAGGTCGTTCTCGA--GCGTCTTGG-CCAGCTCACGCAGCCGCCCAGCGTACTCCACGGC 3025644 Query 1727107 GGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAACCAGCAGCCG 1727154 || ||||||||||| ||| || |||||||| || || ||||| || Sbjct 3025643 CGCAGCCGGGTCGTGGATCGAGCAGGGACCAACAATGACTAGCAGACG 3025596 Score = 87.8 bits (96), Expect = 2e-11 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 450777 GCGCACCGGCCGCGTTTGGCCGATGCGGTGCACGCGGTCGACGGCCTGCGCCTCGGCAAA 450836 ||||||||||||| | || || | ||||||||||||||||| |||||||||||||| Sbjct 766878 GCGCACCGGCCGCTTCTGTCCCAGCCGGTGCACGCGGTCGACCGCCTGCGCCTCGGCCGC 766937 Query 450837 CGGATTGTAGTGCGCGTCCAT 450857 ||||||||| |||| ||||| Sbjct 766938 CGGATTGTACTGCGGCTCCAT 766958 >seq42 Length=705881 Score = 125 bits (138), Expect = 9e-23 Identities = 223/322 (69%), Gaps = 10/322 (3%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || |||||| ||| || |||||||||||||| | || ||||| Sbjct 321355 GCCTTCTGGTAGTCACCGACGCGCTTCTCAAAGAAGTTGGTCTTGCCACCCAGGGAGATG 321414 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||| ||| ||| ||||| | | Sbjct 321415 TTCTCCATAAAGTCGAAGGGGTTGGTGGAACGGTACACCTTGTCGTTGCCGAGGGCGACC 321474 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| |||||||| |||||||| |||||||| ||||||| || ||||||||| | Sbjct 321475 AGCAGACGGTCGGCAACAAACTCAATGTACTGCTTCATGAGGGTGGAGTTCATGCCCAGC 321534 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || |||||| | ||| ||| ||||| | ||| |||| ||| || ||||| || Sbjct 321535 AGAGCACACGGCAGAGCCTCCGTCAGGAACTCCTGCTCAATCTTGACAGCATCGACAATA 321594 Query 868931 ATCTGCCTGGGCACGTCGGC-----CGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGC 868985 || | ||||| | || || || | | ||||| | | | | | | ||||||| Sbjct 321595 ATGT-CCTGGAT-CATCTGCTTGCTCGGGCGGTTGTTCAGGTGG---GAGAACAGCAGGC 321649 Query 868986 AGGCAAAGTCGCAGTGCAACCC 869007 ||||||||||| ||||| ||| Sbjct 321650 AGGCAAAGTCGGTGTGCAGCCC 321671 Score = 104 bits (114), Expect = 3e-16 Identities = 176/253 (70%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || |||||||||||| || ||| | |||| | ||| | Sbjct 322007 CCGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCAGCGAGCCTCAGGCACCT 322066 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 ||||||| |||| || || | ||||||||| |||||||| || ||| |||| Sbjct 322067 GGACCTCAGCGCTGAAGCGCTCGACGAGGTTCTCGTTGACGATGCCATCAGAGGCAGCGA 322126 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGT 869807 | || || || | ||| ||| ||| |||||||||||| | | ||| ||||| Sbjct 322127 AGAAGGCGAGAATGTGGGAGATGAAGAAACGCTCGTCGTCGTTCAGGCGGTTGTGCCAGT 322186 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | ||| | || || | ||||||||| ||||||| || |||||| ||| | Sbjct 322187 CGTGCAGGTCCTTGGACAGATCAATCTCCTCGGCCGTCCAGAAGGAAGCCTCGTGCTTCT 322246 Query 869868 TGTACATCTCCCA 869880 ||||||||| ||| Sbjct 322247 TGTACATCTGCCA 322259 Score = 87.8 bits (96), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 9/194 (5%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| |||| || ||| || | || || ||||| ||||| |||||| Sbjct 321670 CCCTCGTCGCGGGAAATCAGCTCATTGGAGAAAGTCAGACCAGGCATCAGGCCACGCTTC 321729 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||| |||| ||| ||| || |||||||| ||||| || || Sbjct 321730 TTGAGCCAGAAGATGGAAGAGAAGGCGCCGCTGAAGAAAATGCCCTCAACGGCAGCGAAT 321789 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGCC 869356 | | ||| |||| ||||||||| || |||||||| ||||| || ||| Sbjct 321790 GCCACGAGGCGCTGCGCAAAGGTG--GA----CTCCTTGTCAGCAATCCAGCGCAGAGCC 321843 Query 869357 CAGTCGGCCTTTTT 869370 ||||||||||| || Sbjct 321844 CAGTCGGCCTTCTT 321857 >seq11 Length=5116797 Score = 120 bits (132), Expect = 4e-21 Identities = 171/236 (72%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 1574004 GGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGAC-CTGCC 1574062 ||| ||||||| |||||||| |||||| | || |||| | | ||| ||||| Sbjct 2677569 GGCATCGACGTGGTGCGCAACCGGATCAAGGGCTTTGCGCAGAAGAAGGT-GACGCTGCC 2677627 Query 1574063 GCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCA 1574122 | |||| || |||||| | ||||||| |||||||| ||| || | ||||||| || || Sbjct 2677628 GGCCGGGCGGCACAAGATTGTCATCCTGGACGAGGCAGACAGCATGACGTCGGGAGCGCA 2677687 Query 1574123 GCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTG 1574182 |||||| |||||| || ||||| | || | || |||||||| ||||| | ||||| Sbjct 2677688 GCAGGCGCTGCGGCGGACGATGGAGATCTACTCGAATACGACGCGGTTTGCATTTGCGTG 2677747 Query 1574183 CAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGC--TGCGCCATTCTGCG 1574236 |||| |||| | | |||| ||| | || || ||||| || ||||||||||| Sbjct 2677748 CAACCAGTCGAACAAGATCATTGAGCCGCTGCA--GTCGCGATGTGCCATTCTGCG 2677801 Score = 91.5 bits (100), Expect = 2e-12 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 344188 TTCCCCACCGAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGACGAGGCCGTGCGG 344247 || || |||||||| ||||||||||| | |||||| ||| || | | ||||| ||| Sbjct 4237463 TTTCCGACCGAGACAGTCTACGGCCTGGCCGCCGATGCCTCGCGCAGCAACGCCGTCCGG 4237522 Query 344248 CGCATCTTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCACGT 344300 ||||||||| |||||||| ||||| ||| |||||||| | || || ||||| Sbjct 4237523 GGCATCTTTGCCGTCAAGGGTCGACCGTCCGACAACCCGCTGATCGTTCACGT 4237575 Score = 89.7 bits (98), Expect = 6e-12 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 509034 CGCCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGA 509093 ||||||| ||| |||||||| ||||||||| ||| || || | | | | | | Sbjct 3841713 CGCCCGAAGCCCGTGGCTTTGTCGAGAACTCGTACCTGCGTGGTCTTA-CGCCCACTGAA 3841771 Query 509094 TGTTTCTGC-ACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCC 509152 | ||||| | || || | || || || || ||| | ||||||||||||||||||||| Sbjct 3841772 TTTTTCTTCCACGCCATGGCTGGTCGTGAAGGTCTCATTGACACGGCCGTCAAGACGGCC 3841831 Query 509153 GAGACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGAGAGCCTGCAG-ATCAAGCG 509211 |||||||| ||||| |||||||| ||||| || |||| || | ||| |||| Sbjct 3841832 GAGACGGGTTACATTCAGCGCCGACTGGTCAAGGCGCTGGA-AGACGTCAGCGCCAAGTA 3841890 Query 509212 CGGCGGCCTCGTGCGCAACGCCAACGGCGACATCGTCCAGTTTGCCTATGGCGGCGACGG 509271 || |||| ||||||||| | ||||| | ||||||| ||| || | ||||| Sbjct 3841891 CGACGGCACGGTGCGCAACTCTTTGGGCGATGTGATCCAGTTCATCTACGGTGAGGACGG 3841950 >seq40 Length=2234633 Score = 104 bits (114), Expect = 3e-16 Identities = 111/144 (77%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGC-TCCCGTCGGTGCC 1726743 ||||| || | ||||||| | |||||| | || || |||| || | |||||||| || Sbjct 1757851 TGCGGGTGCTTGACGGCGCGGATGGCGTCAA-TGGCGACGCCGAGCGTGCCGTCGGTACC 1757909 Query 1726744 GTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTC 1726803 ||||||||| |||| | | | ||| |||| |||| |||||||||| ||||||||| Sbjct 1757910 GTTCTTGAAACCGACAGGGAAAGACAGGCCCGAGGCCAGTTCGCGGTGCAGCTGGCTCTC 1757969 Query 1726804 GGTCGTGCGCGCGCCCACGGCGCC 1726827 ||| ||||| ||||| |||||||| Sbjct 1757970 GGTGGTGCGGGCGCCGACGGCGCC 1757993 >seq43 Length=799317 Score = 96.9 bits (106), Expect = 4e-14 Identities = 306/462 (66%), Gaps = 12/462 (3%) Strand=Plus/Minus Query 1852168 AAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTC 1852227 ||| | ||||||||||||| |||||||||||| ||||||| | ||||||| |||||| Sbjct 661503 AAACAGCTTGCGCTGGTCGACACCGCCAAACTGGACGTCGACACCCAGGTGCTCCTCGTC 661444 Query 1852228 GAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTGCGGTCCATCTTGAC 1852287 |||| ||||| | ||||| |||| ||||| | | ||| | |||||| Sbjct 661443 GAGGATCTGCAGAATGGGGTACAGCAGACCACTCAGCGGAGCATTGGCCGACTGCTTGAC 661384 Query 1852288 CACCTGAGCGGCGGCCTTTT--GCGCCGTGC-CGGTGCGCACGTGCGCCGCGAGTCGGTA 1852344 |||| ||| ||||||||| ||| ||||| | | | ||| | || ||| ||||| Sbjct 661383 GACCTCGGCGCCGGCCTTTTTGGCGTCGTGCTCAGAGGTGACG-GAGC--AGAGACGGTA 661327 Query 1852345 GAGGTCGAGCGCGTAGGC-GCCGCCGCACTGGTACTCGGTGCCGCGCAC-AAACTCGAGT 1852402 || ||| | | || | | || | |||||| | ||| || || |||| | || Sbjct 661326 GACGTCCATGACATACTCAGACGAC-TTCTGGTAGGACGAGCCACGAACGAAACGC-AG- 661270 Query 1852403 CCGCCCAG-CGGCACGCCGATGTGCTGGAGCATGGCCTTGATGGCAAACTCGTACCAGCG 1852461 | || | | |||| || | ||| |||||||| |||| | ||| ||| || Sbjct 661269 CTGCTCGGTACGCACACCAACAGCCTGCAGCATGGCACGGATGACCCACTGGTAGTAGTC 661210 Query 1852462 GCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCACGTC 1852521 | |||| ||||| || || |||| |||| |||||||||| | |||| | ||| Sbjct 661209 GGTGCGGTACTCGACAAGCTCAATGGGCGCCTTGAGGTTGTCGAGGAAGCCGTGGATGTC 661150 Query 1852522 GGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGATGGG 1852581 ||||| |||| |||| |||||||| || || | | ||| | |||| | || Sbjct 661149 GGCAAGCAGGACGGTGACGTCGCAGCCGGCGTGCAGCAGCTGGGCGATCTTGATGGCAGG 661090 Query 1852582 CACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCC 1852623 ||||| ||| || ||| || ||| || || ||||| || Sbjct 661089 CACAAGGTATCCCGTGTGTGGCCGGCCAGTGGGGGCCGTTCC 661048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107135671218631