Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq41 159 3e-34
seq22 134 1e-26
>seq41
Length=3900177
Score = 159 bits (176), Expect = 3e-34
Identities = 1052/1671 (63%), Gaps = 50/1671 (3%)
Strand=Plus/Plus
Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGCAATATTTTGA 138417
||||||||||| |||||||| ||| | || | | ||| || | | ||| || ||
Sbjct 917148 ATCTCCCACACCGTCTTGTACAGAGCCTTGATGTCTGCCGGGATGTTGGGAATGTTCTGG 917207
Query 138418 ATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTG 138477
|| ||||| | ||||||||||| || |||||| || ||||| || | |
Sbjct 917208 ATCGAACCGTTCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGACCCATGTCG 917267
Query 138478 ATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGA 138537
| || ||| || | ||| | ||| | ||||| || |||||||||| || || ||
Sbjct 917268 ACCAGGTCCTTGAGCAGCCACGGGTTGACCACCTGGAACTCACCGGCCAGCACACGCCGC 917327
Query 138538 ACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTG 138597
|||||||||| ||| | ||||| || | |||||||| ||||||||||| | |||
Sbjct 917328 GAGTAAATGTTGGATGTGTACGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGTGACGTC 917387
Query 138598 GTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGT 138657
| ||| |||||||| |||||||| ||| || || | |||||| |||||| |
Sbjct 917388 GACGCCGTCGGCATCGGCGCCACCAGCAGACTGTTGCGCACACCGTGCTCCTTGAT--CT 917445
Query 138658 TC--CTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715
|| | ||||| ||| ||||||| || || | | |||||| ||| ||
Sbjct 917446 TCAGCCGCAGCGAGTCCCAATCCCACAGGTCCGATGGCGTGACATCCCACATGTCGGGCT 917505
Query 138716 GTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTA--TACACCAAACTCTTG 138773
| | || ||| | ||| || || || | | ||| | | || | |||||
Sbjct 917506 GCAGAATACCCTGCGACACAGGAGACCCCTCATATGTCTGGTAGGTGC-CCTCAATCTTG 917564
Query 138774 CGCCAACTCGTTGCTCGCCTC---GAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTG 138830
|||| ||| || || ||| ||||| | | ||| || || || | |||||
Sbjct 917565 -GCCAGCTC---GCACGACTCCGTCAGCGCCGCGTGGTAGATGGTCTCAAAGACCTGCTT 917620
Query 138831 ATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGC 138890
|| |||| || ||||||| ||| | |||||||| ||| | ||| ||||| ||
Sbjct 917621 GTTCAGCAGGCGTGCCTCGGGAGACTCAAAGGGCATGCGCAGCGCCAGGAAGGCGTCCGC 917680
Query 138891 CAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTT 138949
||| || ||||| |||| || | || || ||||||| || || || || ||||
Sbjct 917681 CAGACCCTGCACACCCAGACCAATGGGACGGTGGCGCA----TGTTACTGTTCCGTGCTT 917736
Query 138950 C---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAG 139006
| | ||| || ||||| ||||| ||||| ||| | || || || |||| || |
Sbjct 917737 CTGGCACAGGGTAGTAGTTGACATCAATGATGCGGTTCAGGTTGCGGACAACCAGCTGCG 917796
Query 139007 TCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAA 139066
| || | | || | || || || | | |||||| | | ||||| ||
Sbjct 917797 TGACATCGTGCAGTCTCTGGAAGTCATACG---ACTCGTTGTTATAGTCGACG----AAA 917849
Query 139067 ATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATT 139126
| || |||| ||||| | ||||||||| ||||| ||||| || | ||| |
Sbjct 917850 GACGGAAGAGCCAAA--GAGGCCAAGTTGCACACAGCCACCTCGTCCGGAGCCGAGTACT 917907
Query 139127 CGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTT 139186
||||||| || | ||||| || | ||| ||||| | || | || ||||| |
Sbjct 917908 CGACAATCTCCGTGCACAAGTTCGAGCTGCGGATGGTACCCAGGTTCTTCTGGTTGCTCT 917967
Query 139187 TTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTA 139246
| ||||| || || ||||| ||||| | || |||| || ||| || | ||| |
Sbjct 917968 TGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCCGTCTGCGCCTCCA 918027
Query 139247 TAATGAATTTGAACAAGTCCCTAG-CTTG-TATT-TGACGCACGTAAAGTTCGTCGCGCT 139303
|||| | ||| | | | |||| | || | || || | | |||||||
Sbjct 918028 GAATGGCATACCACAGCTTCTGGGCCTTGATCTTCTTGCGACCG---CGACCCTCGCGCT 918084
Query 139304 CGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACT 139363
|||| || ||||| || | || || || |||||| |||| || || || |
Sbjct 918085 CGTATTTCTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAATCAGCCAGGCCGGCGCATT 918144
Query 139364 TGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCG 139423
|| || ||||| |||| ||| |||||||| || || ||| |||||||||| || |
Sbjct 918145 CGTTGGGGCACATCAGCGTCCACTCGCCGTTCTTCTCCACACGCTTCATGAACAGGTCGG 918204
Query 139424 GAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTT 139483
| ||||| | |||| | | ||| || || || ||| || |||
Sbjct 918205 GGATCCAGAGTGCGAGGAAAAGATCACGGGCACGGACCTCCTCCTTGCCTTGGTTCTTCC 918264
Query 139484 TCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGC 139543
|| || ||||| ||||| || || || ||||| || |||| |||||| | ||| |
Sbjct 918265 GCAGGTCGAGGAACTCAAAGACATCGGCATGCCACGGCTCCAAGTAGATGCAGAATGCAC 918324
Query 139544 CTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACA 139600
| ||| |||||||| ||||| |||| || | | || ||||| || || | ||
Sbjct 918325 CGGGCCGCTTGTTGCCACCCTGATCCACGTAGCGGGCCGTGTTGTTGAAGACACGAAGCA 918384
Query 139601 TCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATGGGACTGTTGCGAGCTCG 139658
| || | ||| | | ||| ||||| |||| ||| ||| | | | ||| ||
Sbjct 918385 TGGGGATGATGCCGTTGGATGTGCCGTTAGTGC--CGGCAATGTAAGAGCCGGTAGCACG 918442
Query 139659 GACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGC 139717
| | ||| ||||| | ||||| || || | ||||| || | | || ||
Sbjct 918443 AATGCGATGGACATTCAGACCGATGCCACCAGCCGTCTTGGAGATCATGGCACACGTCTT 918502
Query 139718 GTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACG 139777
| | || ||||| || || ||||| || |||| ||| || || ||||| || |
Sbjct 918503 G-AGCGTGTCGTAGATGCCCTCAATGCTATCATCCTTCATGTCTACGAGGAAGCAGGAGG 918561
Query 139778 AAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTT 139837
| || || | | ||||||||| || || || || || ||||| || | |
Sbjct 918562 ACAGCTGAGCCTGGGGCGTGCCGGCGTTGAAAAGCGTCGGCGAGGCATGCGTAAAGAACT 918621
Query 139838 GTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGA 139897
|||||||| | | ||| || |||| | | | | | ||| || |||||| |
Sbjct 918622 TGTTCGACATGTAGTTGTATGTCTCGACAACACGCTCCACATCATCGCCCCAGATACCAA 918681
Query 139898 CAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCA 139957
| | || ||||| | ||| || || ||| ||| | | | || |||| || |
Sbjct 918682 CGGCCACGCGCATAATCATGTGCTGCGGCCGCTCGACGATCTTACCATCGAGCTTGAGGA 918741
Query 139958 GATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
| || |||| ||| ||||||||| |||||||||| |||||||| ||
Sbjct 918742 GGTAGGACCG--CTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTC 918790
>seq22
Length=1908885
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || || ||||| || || |||||| | ||||| || | |
Sbjct 662885 ATGCAAATCTTTGTCAAGACACTCACCGGCAAGACGATTACGTTGGAAGTTGAGTCGTCT 662826
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | ||||| |||||||||||||| || || || |||||||| ||
Sbjct 662825 GACACAATCGACAACGTAAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAG 662766
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA-TTCGAGAAACATGTCAGATTATAA 24882
|| || |||| || || || || ||||||||||| | || || |||| || || ||
Sbjct 662765 CAGCGCCTGATTTTCGCGGGCAAGCAGCTGGAGGACGGCCGGACAC-TGTCTGACTACAA 662707
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| ||||| || ||||||||| |||| |||| || ||
Sbjct 662706 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 662659
Score = 98.7 bits (108), Expect = 9e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||||||||| | || || || || || || ||||| || || || || || |
Sbjct 1643954 ACCATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 1644013
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
||||||| | || | || || |||||||| ||||| || || || || || ||
Sbjct 1644014 TCCGACACTATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCAGAC 1644073
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || || ||||||| || || || |||||||||||| | | | |||| || ||
Sbjct 1644074 CAGCAGCGCCTGATCTTCGCAGGCAAGCAGCTGGAGGATGGCCGGACCCTGTCCGACTAC 1644133
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
||||| || ||||| || || ||| ||||| |||| | || || ||||
Sbjct 1644134 AACATCCAGAAGGAGAGCACGCTCCACCTGGTGCTGCGGCTCCGTGGTGGCG 1644185
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| ||||| || || || || || || || || | ||
Sbjct 663341 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCC 663282
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| || ||||| || || || || || || ||
Sbjct 663281 GATACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCAGACCAG 663222
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||| || || ||| ||||||| | | | | || || || |||
Sbjct 663221 CAGCGCCTGATCTTTGCTGGCAAGCAGTTGGAGGACGGTCGCACCCTCTCCGACTACAAC 663162
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || ||| ||||| | || | ||||| ||
Sbjct 663161 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGTCTCCGCGGTGG 663115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897358180040
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