Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq22 89.7 4e-13
>seq22
Length=1908885
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| |||||||| || | |||||||| || ||||| | ||| ||| |
Sbjct 662885 ATGCAAATCTTTGTCAAGACACTCACCGGCAAGACGATTACGTTGGAAGTTGAGTCGTCT 662826
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | ||||| |||||| ||||| || || | || || ||
Sbjct 662825 GACACAATCGACAACGTAAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAG 662766
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | || |||| ||||| || ||||||||||| | | | ||| || | || ||||||
Sbjct 662765 CAGCGCCTGATTTTCGCGGGCAAGCAGCTGGAGGACGGCCGGACACTGTCTGACTACAAC 662706
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || || || || ||| ||||| ||||| | | ||||| || ||
Sbjct 662705 ATCCAGAAGGAGTCGACGCTGCACTTGGTGCTGCGTCTGCGTGGTGG 662659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841383645199
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |