Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq22 114 3e-20
>seq22
Length=1908885
Score = 114 bits (126), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || ||||| || ||||||||||| ||| |||
Sbjct 662654 CAGATTTTCGTCAAGACCCTGACGGGTAAGACGATTACGCTGGAAGTGGAATCTTCGGAC 662595
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| |||| || ||| |||||||| || || || || ||| ||| ||| ||
Sbjct 662594 ACAATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCGCCTGACCAGCAG 662535
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || || ||||| || ||||||||||||||||| |||| || | || |||||| |
Sbjct 662534 CGCCTGATTTTCGCGGGCAAGCAGTTGGAAGATGGCCGGACGCTGTCGGACTACAACATT 662475
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||||| || || ||||| ||
Sbjct 662474 CAGAAGGAGTCGACGCTGCACCTGGT 662449
Score = 89.7 bits (98), Expect = 1e-12
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| || ||| ||| || ||||| || || || |||||| | || || || || |||
Sbjct 663110 CAAATCTTTGTCAAGACACTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCCGAC 663051
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || || || || || ||| ||| ||
Sbjct 663050 ACGATCGACAATGTCAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCAGACCAGCAG 662991
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || || |||||| | || ||||| | || | |||| |||||| ||
Sbjct 662990 CGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCCGACTACAACATC 662931
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379
||||| ||||||||||| ||||| |||
Sbjct 662930 CAGAAGGAGTCTACTCTCCACCTGGTT 662904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820148890603
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |