Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq42 91.5 1e-13
>seq42
Length=705881
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771
|||||| || || | ||| |||||| | || | ||||||||| |||||||||| |||
Sbjct 322085 GCTCGACGAGGTTCTCGTTGACGATGCCATCAGAGGCAGCGAAGAAGGCGAGAATGTGGG 322144
Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831
| ||||| || || | ||||||||| |||| |||||| | | |||||||||||
Sbjct 322145 AGATGAAGAAACGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCGTGCAGGTCCTTGGACA 322204
Query 110832 TGTCGATCTCTTCGACCTTCCAG 110854
|| ||||| ||| || |||||
Sbjct 322205 GATCAATCTCCTCGGCCGTCCAG 322227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094160761760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |