Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq42 91.5 1e-13 >seq42 Length=705881 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || || | ||| |||||| | || | ||||||||| |||||||||| ||| Sbjct 322085 GCTCGACGAGGTTCTCGTTGACGATGCCATCAGAGGCAGCGAAGAAGGCGAGAATGTGGG 322144 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||| || || | ||||||||| |||| |||||| | | ||||||||||| Sbjct 322145 AGATGAAGAAACGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCGTGCAGGTCCTTGGACA 322204 Query 110832 TGTCGATCTCTTCGACCTTCCAG 110854 || ||||| ||| || ||||| Sbjct 322205 GATCAATCTCCTCGGCCGTCCAG 322227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094160761760