Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramalina_20peruviana_20[genbank_20GCA_5F001956345.1_202017-01-18] 1,657 sequences; 26,990,446 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq507 93.3 9e-14 >seq507 Length=66309 Score = 93.3 bits (102), Expect = 9e-14 Identities = 153/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 319453 TCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATC 319512 ||||| ||| ||| |||||||||| ||||||||| || |||||||| || || ||| Sbjct 23997 TCGTAGTGGTAGATATCGGTGCAAACATTGTCGAGGAAACCAGAGTCGTGAGAGACGATC 24056 Query 319513 ACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAA-CCACCTCACGTTAGACAC 319571 | | ||| | || || | |||| ||||| |||| ||| | ||||| || Sbjct 24057 AAGGACGTGATTTCGGTATGAGACTTCAGATATTCT-TCAAGCCATTTGACGTTCCCAAC 24115 Query 319572 AGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACG 319631 |||||| ||||||||||| ||||| |||| | | || || ||||| ||||| Sbjct 24116 GTCAAGATGATTGGTCGGCTCATCAAGGAGCAAGACATCAGCACCCATTAGCATGGCACG 24175 Query 319632 TGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAGAG 319669 || ||||| || ||||| ||||| || || || |||| Sbjct 24176 AGCCAGAGCAAGCTTCATCTTCCAGCCACCTGATAGAG 24213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057801542065910