Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramalina_20peruviana_20[genbank_20GCA_5F001956345.1_202017-01-18] 1,657 sequences; 26,990,446 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1121 91.5 2e-13 >seq1121 Length=34987 Score = 91.5 bits (100), Expect = 2e-13 Identities = 169/248 (68%), Gaps = 8/248 (3%) Strand=Plus/Plus Query 145918 AGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATC 145977 |||||||| || ||||| ||| |||| | || |||||| | || || | |||| | Sbjct 25834 AGGTCCGCTGGATTCCATGCGCTGAGAATGATTCTCCTGTCGTAAGGCTTGTTTTTGAGC 25893 Query 145978 TCCCCTATCAGGTCCCTGAGC----TGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA 146033 | ||||| ||| ||| || || || || | || |||||| || |||| Sbjct 25894 T----TATCAATGACCTCAGCCAATTGATCAACCCCTTTTCCGGTGTAATCRGTTTTGGC 25949 Query 146034 GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 || || || ||||||| ||||| | ||||||||| ||||||||||| || || ||||| Sbjct 25950 ATCAACATATTCGGCCCCAAAGTGTCGCCACTGGAAGCCGTAGACGGGTCCAAGATCCCC 26009 Query 146094 GGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCA 146153 |||||| ||| || || | | | || | || || || || ||| ||||||| Sbjct 26010 CACCTCCCTCTGCGATAGACCTATGCTGTCAAGATATTCYCGAGAGCCATTGCCGTCCCA 26069 Query 146154 GATCTTGA 146161 ||||||| Sbjct 26070 TATCTTGA 26077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590064578034280