Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramalina_20peruviana_20[genbank_20GCA_5F001956345.1_202017-01-18] 1,657 sequences; 26,990,446 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1121 84.2 2e-11 >seq1121 Length=34987 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/233 (68%), Gaps = 16/233 (7%) Strand=Plus/Minus Query 20217 GGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGA 20276 ||||||| | || || || || || || || ||| |||| ||||| || ||||||||||| Sbjct 26010 GGGGGATCTTGGACCCGTCTACGGCTTCCAGTGGCGACACTTTGGGGCCGAATATGTTGA 25951 Query 20277 CATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT 20336 || || |||| ||| |||| || |||||||| | || ||| || | Sbjct 25950 TGCCAAAACYGATTACACCGGAAAAGGGGTTGATCAATTGGCTGAGGTCATTGATAAGCT 25891 Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAA-----CG---CTAAA 20388 |||| || || ||||||| ||||| ||| | |||| ||||| || ||||| Sbjct 25890 CAAAAACAAGCCTTACGACAGGAGAATCATTCTCAGCGCATGGAATCCAGCGGACCTAAA 25831 Query 20389 GATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGT 20441 || | ||||| || || || ||||||||| | ||||||||||| || Sbjct 25830 GAAG--------ATGGCCTTACCACCTTGTCATATGTTTTGCCAATTTTATGT 25786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399175938603865