Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramalina_20peruviana_20[genbank_20GCA_5F001956345.1_202017-01-18] 1,657 sequences; 26,990,446 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq379 86.0 4e-12 >seq379 Length=117818 Score = 86.0 bits (94), Expect = 4e-12 Identities = 132/181 (73%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 71418 GGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTC-CT 71476 |||||| | || |||| || |||||||||||||| ||||| |||||||| || || || Sbjct 85596 GGTCATTCGCGAAGGAATAGCATGGGGGTTGATGATCAGGTCTGGCACCACGCCTTCACT 85537 Query 71477 TGTCGAAGGGCATGTCCTCCTG--GGTCAGGACAGCTCCGCATGTCCCCTTTTGCGCCGT 71534 || ||| |||||||||||||| ||| || | ||| ||||| || || |||| Sbjct 85536 AGT-GAAAGGCATGTCCTCCTGGCGGTAAGTGATG--CCGATCGTCCCTTTCTG-ACCGT 85481 Query 71535 GAAT-GACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGA 71593 | | || |||||||||||||| |||| || | ||| || |||| | ||||||| Sbjct 85480 GCCTGGAAGCAAACTTGTCGCCAATCTGGGGAATCTTGGTCGTTCTCATGCGAACCTTGA 85421 Query 71594 C 71594 | Sbjct 85420 C 85420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338757958750728