Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramalina_20peruviana_20[genbank_20GCA_5F001956345.1_202017-01-18] 1,657 sequences; 26,990,446 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq379 89.7 4e-13 >seq379 Length=117818 Score = 89.7 bits (98), Expect = 4e-13 Identities = 134/182 (74%), Gaps = 10/182 (5%) Strand=Plus/Plus Query 52017 GTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGTT- 52075 |||||||| | |||| || ||| | || |||| |||||||||||||| || Sbjct 85420 GTCAAGGTTCGCATGAGAACGACCAAGATTCCCCAGATTGGCGACAAGTTTGCTTCCAGG 85479 Query 52076 CACGGCGCAAAAGGGGACGTGCGGAGCCGTC-CTGACC--CAGGAGGACATGCCCTTCGA 52132 ||||| || || |||||| ||| | || || ||| |||||||||||||| ||| | Sbjct 85480 CACGGT-CAGAAAGGGACGATCGG---CATCACTTACCGCCAGGAGGACATGCCTTTC-A 85534 Query 52133 CAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCATCCAGGATGA 52191 | || || || |||||||| ||||| |||||||||||||| || |||| || | |||| Sbjct 85535 CTAGTGAAGGCGTGGTGCCAGACCTGATCATCAACCCCCATGCTATTCCTTCGCGAATGA 85594 Query 52192 CC 52193 || Sbjct 85595 CC 85596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408609348095261