Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramalina_20peruviana_20[genbank_20GCA_5F001956345.1_202017-01-18] 1,657 sequences; 26,990,446 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1307 100 7e-16 >seq1307 Length=69414 Score = 100 bits (110), Expect = 7e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| || || |||||| | ||||| ||| ||| |||||| |||| || ||| Sbjct 38675 ACAGGCAAGACCATCACTCTCGAAGTAGAATCTTCAGACACAATCGACAATGTCAAGGCC 38734 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| |||||||| || |||||| || | | ||||||||||| || Sbjct 38735 AAGATACAAGATAAAGAAGGCATCCCCCCGGACCAACAGCGCTTGATCTTCGCCGGCAAA 38794 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || || |||||||| | || | |||| |||||| |||||||||| || || || || Sbjct 38795 CAATTAGAAGATGGCCGCACACTCTCCGACTACAACATCCAGAAAGAATCCACCCTACAT 38854 Query 206374 CTTGT 206378 || || Sbjct 38855 CTCGT 38859 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || || || || |||| ||||| ||| ||||| |||| Sbjct 38437 CAAGACCCTGACTGGCAAGACCATTACCCTGGAGGTGGAGTCTTCGGACACCATCGACAA 38496 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 |||||| |||||||| || ||||| || || || || || | || ||||| Sbjct 38497 TGTAAAGGCCAAGATTCAGGACAAAGAGGGTATCCCTCCCGATCAACAGCGTCTCATCTT 38556 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | ||||| || | ||| | |||| |||||| |||| || || || Sbjct 38557 CGCCGGCAAGCAGCTCGAAGACGGCCGTACTCTCTCCGACTACAACATCCAAAAGGAATC 38616 Query 206364 TACTCTTCACCTTGT 206378 |||||||| || || Sbjct 38617 CACTCTTCATCTCGT 38631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181795709575097