Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramalina_20peruviana_20[genbank_20GCA_5F001956345.1_202017-01-18] 1,657 sequences; 26,990,446 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq379 87.8 1e-12 >seq379 Length=117818 Score = 87.8 bits (96), Expect = 1e-12 Identities = 113/148 (76%), Gaps = 10/148 (7%) Strand=Plus/Plus Query 52765 AGATGGGCGACAAGTTTGCGTCGTT-CACGGCGCAAAAGGGGACGTGCGGAGCCGTC-CT 52822 |||| |||||||||||||| || ||||| || || |||||| ||| | || || Sbjct 85454 AGATTGGCGACAAGTTTGCTTCCAGGCACGGT-CAGAAAGGGACGATCGG---CATCACT 85509 Query 52823 GACC--CAGGAGGACATGCCCTTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAA 52879 ||| |||||||||||||| ||| || || || || |||||||| ||||| |||||||| Sbjct 85510 TACCGCCAGGAGGACATGCCTTTC-ACTAGTGAAGGCGTGGTGCCAGACCTGATCATCAA 85568 Query 52880 CCCCCACGCCTTTCCCTCCAGGATGACC 52907 |||||| || |||| || | |||||| Sbjct 85569 CCCCCATGCTATTCCTTCGCGAATGACC 85596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406302194688444