Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq4 105 7e-18
>seq4
Length=2394644
Score = 105 bits (116), Expect = 7e-18
Identities = 203/297 (68%), Gaps = 3/297 (1%)
Strand=Plus/Minus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
||||| || |||||||| || ||| | || ||||| ||||||||||| |||||
Sbjct 143330 ATATATGTGTCGATGAGCAGAGAGTATGTCTCCGAGTGGATGTTCTCCATCATAATCTGG 143271
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| || || || | || || || || | ||||| || | |||
Sbjct 143270 AAGCCGTAGAAGCAGCGAGCCTCAGGGATCTGGACCTCGCTGCTGAATCTCTCGACGAGA 143211
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
|| ||||| |||||||| || ||||||||| || ||||| || || ||||| |||
Sbjct 143210 TTCTCGTTGACGATGCCATCAGACGCGGCGAAGAAGGCCAAAATGTGTGAGATGAAGTAT 143151
Query 17414 TTTTCGTC--CGGTG-TAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470
|| ||||| || || | | ||| || | | ||| ||||| | ||| | ||
Sbjct 143150 TTCTCGTCGTCGTTGATCTTGTTGTTCCAATCGTGAAGATCCTTGGACAGATCAATCTCC 143091
Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTAT 17527
|| | |||||| || || | ||||| || ||||| | |||||| | |||| ||
Sbjct 143090 TCAGCGGTCCAGAAGGACGCTTCGGCCTTCTTGTACATTTGCCAAATCTAATTGAAT 143034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545114801000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |