Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq16 242 4e-59
seq4 109 7e-19
>seq16
Length=1288267
Score = 242 bits (268), Expect = 4e-59
Identities = 1183/1873 (63%), Gaps = 33/1873 (2%)
Strand=Plus/Plus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
||||| || ||||| || | || | || ||||| || ||||||||||| || || |||
Sbjct 163775 GTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTCTTAAGA 163834
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927
||||| |||| ||| |||||||| || || | ||| | |||| ||| |||
Sbjct 163835 CCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTCGGGTCTTTCATA 163894
Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987
||||| |||| || ||| ||||| |||||||| || | ||| |||||||| | |
Sbjct 163895 TGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATCTGGACA 163954
Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047
| || |||| |||||||| | ||| || || | || |||||| | || | |
Sbjct 163955 ACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCGGGGATG 164014
Query 53048 TTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104
|||| | ||||| | || || || | || || | ||||| || | ||| |
Sbjct 164015 TTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGTTCTTCATGGCGTCAGAC 164074
Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164
|| || | || | | | | ||||| || || || || || || || |||
Sbjct 164075 CACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTGGAACTCGCCA 164134
Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224
| | ||||| || ||| ||||| || ||||| || | |||| || || |||
Sbjct 164135 GCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTCAAAGCACTCGTTGTTACCC 164194
Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284
|| || || | ||| || || ||||| ||||| || | | ||| || | || ||
Sbjct 164195 AAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGTTGCGAATGCCA 164254
Query 53285 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 53344
| | |||||| || || || | | |||| | ||||||||| || || ||
Sbjct 164255 TGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGAAGGCTTCACATTC 164314
Query 53345 NNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTATCGTA 53400
|| ||||| || | ||| || | | ||| | ||||| |||
Sbjct 164315 CACATGTCAAACTGCAGAATGCCTTGAGATACAGGAG----AGCCTTCGTATGTGGAGTA 164370
Query 53401 TGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 53460
||| |||| || || || || || || | || | | ||||| || ||
Sbjct 164371 TGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGCATGGTAAATTGTCTC 164430
Query 53461 GAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTA-TCAAATGGATAATTTAAGAGA- 53518
|| |||| ||| || || ||| |||| || ||| | || || || | ||| |
Sbjct 164431 AAATATCTGCTTGTTCAGCTCTCGTGCCTC-AGGAGACTCGAAAGGC-AGGCGAAGGGCT 164488
Query 53519 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 53578
| ||||| ||||| | || ||||| || | ||| || || || || | | | || |
Sbjct 164489 AGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGCATGTTGCTG 164548
Query 53579 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACA 53638
| | ||||| |||| || || || || | || || || ||||| | ||||| |||
Sbjct 164549 TTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAAGTTTCGAACA 164608
Query 53639 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATC----TATTACAAA 53694
| |||| | ||||| | ||| || | || ||| | || || || | || |
Sbjct 164609 ACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGCCTTCATTGTAGTCCACA 164668
Query 53695 CATGTT--CAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TA 53751
| | ||| || | || |||| || || ||||| ||||||| | | ||| ||
Sbjct 164669 AAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTCATCGGGGGC-GCAGTA 164727
Query 53752 TTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACT 53811
| || ||||| ||||| ||||| | |||||| || | ||| | || || ||
Sbjct 164728 CTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAGATTCTTCTGGTTGCT 164787
Query 53812 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTC 53871
||| || || ||||| || || || ||||| || | || |||||| |||||| ||
Sbjct 164788 CTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGTTTCAGTCTGGGCCTC 164847
Query 53872 TATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT-TTCTCTTT 53930
|| || || | ||| | | ||||| || | ||| | ||| || ||
Sbjct 164848 TAGGATGGCATACCAAAGCTTCTGTGCCTTGATGGTC---TTGCGACCCTTGTTGAGCTT 164904
Query 53931 CGTATAGT----GTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 53986
| ||| | ||| | | | || |||||||| || | | ||| || |||
Sbjct 164905 CTCATACTTTTCGTAGAGAGCC--TCGAACTCGTCACCGTAGCAGTCAGCCAGGCCGGGA 164962
Query 53987 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 54046
||||| | |||||||||| | ||| || |||| | | || || ||||| ||||||
Sbjct 164963 CATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTCAACACGCTTCATGAAGAGA 165022
Query 54047 TCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTC 54106
||||||||||| || || | || ||||| | | | | ||| || || || |||
Sbjct 165023 TCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTGCCATGGTTC 165082
Query 54107 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATA 54166
||| || || | |||| | | | || | |||||| || || | ||| || | | |
Sbjct 165083 TTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAGATTGCGAAA 165142
Query 54167 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 54226
| || || || ||||| || || ||||| | || | ||| |||||||| | |||| |
Sbjct 165143 GCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTGAAGACTCGC 165202
Query 54227 AACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCA 54286
| ||| ||||| | ||| ||||| | |||||||| || | ||| || || |||||
Sbjct 165203 AGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAACCGGTGGCA 165262
Query 54287 CGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 54346
|| ||| || || || || || || ||||| || ||||| | ||| ||
Sbjct 165263 CGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTGCACAGGTC 165322
Query 54347 TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 54406
|| | || || || |||||||| || || |||||| |||||| | ||| || || |
Sbjct 165323 TTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGAAGCATGAA 165382
Query 54407 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 54466
|||| ||| || || |||||||| || | ||| || || || || || || |
Sbjct 165383 GACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTGTGAAAAAC 165442
Query 54467 TTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCT 54526
|| || | | ||||| || || || || || | || | || ||
Sbjct 165443 TTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCCCAGATACCG 165502
Query 54527 ACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGC 54586
|| || |||||||| | ||||||||| |||| |||||||||||| | | ||| ||
Sbjct 165503 ACAGCAACACGCATGATCATGTGCTGGGGTCGCTCAACGATCTTGCCATCAAGTTTAAGG 165562
Query 54587 AAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 54646
| ||||||| | || |||||||| ||||| ||||| | ||| |||||||| || ||
Sbjct 165563 AGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATATTGGTAGTTGAAGTCTCGGTCATAC 165622
Query 54647 ATAATAACTGAGT 54659
| ||| | ||||
Sbjct 165623 ACAATGGCGGAGT 165635
>seq4
Length=2394644
Score = 109 bits (120), Expect = 7e-19
Identities = 295/444 (66%), Gaps = 8/444 (2%)
Strand=Plus/Minus
Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903
|| ||||| || | || || || ||||| || || || || || | | || || ||
Sbjct 143947 TTCTGGTAATCGGCGACTCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAGATGTTC 143888
Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAA-AT 23962
|||||||| ||| | || |||| || ||||| | ||| | | |||| || |
Sbjct 143887 TCCATGAAGTCGAAGGGGTTGGACACCTTATATAC-CTTCTCGTTGCCAAGAGCGACCAG 143829
Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATT-TCACAATTCATTCCTATAA 24021
| || ||| || || ||||| ||||| ||||||| || | ||||| || | ||
Sbjct 143828 GAGTCGATCGGCAACGAACTCGATATACTGCTTCATCAGGGTCGCG-TTCATGCCAAGAA 143770
Query 24022 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081
| | ||| |||||| | || || || ||||| ||||| ||| ||||| ||||
Sbjct 143769 GACCACATGGCAGAGCCTCGGTCAGGAACTCTTGCTCAATTTTGACAGCGTCAACGATAA 143710
Query 24082 TAGATCTT--ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 24139
| || | || || || || ||| ||| | || || || | | ||| ||
Sbjct 143709 CA--TCCTGGACCACTTGTTTGCTTGGTCGATTCCTCAAGTGAGAGAATAGGAGACAGGC 143652
Query 24140 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 24199
|||||| || ||||||||||||| || | |||||||| || ||||| || ||
Sbjct 143651 GAAATCAGTATGGAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAATGTGAGACCTGG 143592
Query 24200 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 24259
||| ||||||||||| || | ||| || ||||| ||||| | || ||||| || ||
Sbjct 143591 CATGAGGCCACGCTTCTTCAACCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACC 143532
Query 24260 TTCTACTGCCGCAAAGGCAATAAG 24283
||| || || || ||||||| |||
Sbjct 143531 TTCGACGGCAGCGAAGGCAACAAG 143508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721043386000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |