Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq16 253 3e-62
seq4 104 3e-17
>seq16
Length=1288267
Score = 253 bits (280), Expect = 3e-62
Identities = 1187/1873 (63%), Gaps = 49/1873 (3%)
Strand=Plus/Plus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||| || ||||| || | || | || ||||| || ||||||||||| || || |||
Sbjct 163775 GTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTCTTAAGA 163834
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165
||||| |||| ||| |||||||| || || | ||| | |||| ||| |||
Sbjct 163835 CCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTCGGGTCTTTCATA 163894
Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225
||||| |||| || ||| ||||| |||||||| || | ||| |||||||| | |
Sbjct 163895 TGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATCTGGACA 163954
Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285
| || |||| |||||||| | ||| || || | || |||||| | || | |
Sbjct 163955 ACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCGGGGATG 164014
Query 62286 TTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342
|||| | ||||| | ||| || || | || || | ||||| || | ||| |
Sbjct 164015 TTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGTTCTTCATGGCGTCAGAC 164074
Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402
|| || | || | | | | ||||| ||||| || || ||||| || |||
Sbjct 164075 CACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTGGAACTCGCCA 164134
Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462
| | ||||| || ||| ||||| || ||||| || | |||| || || |||
Sbjct 164135 GCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTCAAAGCACTCGTTGTTACCC 164194
Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62522
|| || || | ||| || || ||||| ||||| || | | ||| || | || ||
Sbjct 164195 AAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGTTGCGAATGCCA 164254
Query 62523 TATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNN 62582
| | |||||| || || || | |||| | ||||||||| || || |||
Sbjct 164255 TGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGAAGGCTTCACATTC 164314
Query 62583 NNNNNNNNATATTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTATCATA 62638
| | || ||||| || | ||| || | | ||| | ||||| ||
Sbjct 164315 CACATGTCAAACTGCAGAATGCCTTGAGATACAGGAG----AGCCTTCGTATGTGGAGTA 164370
Query 62639 TGGTCCTTCCTTCTCAGCTAGTT---TACAACTCGCCTCTAATGCACCGTAATAAATGGT 62695
||| |||| || || || || | | || || | || | | ||||| ||
Sbjct 164371 TGGGCCTTGCTCCTTGGCAAGCTCCATGGAA---GCAGTGAGAGCGGCATGGTAAATTGT 164427
Query 62696 TTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG 62755
||||| |||| ||| || || ||| |||| || || || || || | ||| |
Sbjct 164428 CTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGACTCGAAAGGC-AGGCGAAGGG 164486
Query 62756 A-ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 62814
| ||||| || || | || ||||| || | ||| || || || || | | | ||
Sbjct 164487 CTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGCATGTTGC 164546
Query 62815 AGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62874
| | | ||||| |||| || || || || | || || || ||||| | |||| |
Sbjct 164547 TGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAAGTTTCGAA 164606
Query 62875 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC----TATTACA 62930
||| |||| | ||||| | ||| || | || ||| | | || || || | ||
Sbjct 164607 CAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGCCTTCATTGTAGTCCA 164666
Query 62931 AACATGTT--CAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCA- 62987
| | | ||| || | || |||| || || ||||| ||||||| | | |||
Sbjct 164667 CAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTCATCGGGGGC-GCAG 164725
Query 62988 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTA 63047
|| | || ||||| ||||| ||||| | ||| || || | ||| | || ||
Sbjct 164726 TACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAGATTCTTCTGGTTG 164785
Query 63048 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 63107
||||| || || ||||| || || || ||||| || | || |||||| |||| |
Sbjct 164786 CTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGTTTCAGTCTGGGCC 164845
Query 63108 TCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATA----GAT--TTGT--ATCTC 63158
|||| || || | ||| | | || | ||||| || | || |||| | ||
Sbjct 164846 TCTAGGATGGCATACCAAA-GCTTCTGTGCCTTGATGGTCTTGCGACCCTTGTTGAGCTT 164904
Query 63159 CT--TTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63216
|| | || ||||||| |||| | |||||||||| || | | |||
Sbjct 164905 CTCATACT-TTTCGTAGAGAGCCT---------CGAACTCGTCACCGTAGCAGTCAGCCA 164954
Query 63217 ATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63276
| |||||||| | |||||||||| | ||| || |||| | | || || ||||
Sbjct 164955 GGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTCAACACGCTTCA 165014
Query 63277 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTC 63336
| ||||||||||||||||| || || | || ||||| | || | | ||| || || |
Sbjct 165015 TGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTGC 165074
Query 63337 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63396
| |||||| || || | |||| | | | || | |||||| || || | ||| |
Sbjct 165075 CATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAGA 165134
Query 63397 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63456
| || | | | || || || ||||| || || ||||| | || | ||| ||||||||
Sbjct 165135 TTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTGA 165194
Query 63457 AAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTC 63516
| |||| || ||| ||||| | |||||| || | |||||||| || | ||| || |
Sbjct 165195 AGACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAAC 165254
Query 63517 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63576
| ||||||| ||| || || || || || || ||||| || ||||| | ||
Sbjct 165255 CGGTGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTG 165314
Query 63577 CGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAA 63636
| || || | ||||| || ||||| || ||||| ||||| |||||| | ||| |
Sbjct 165315 CACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGA 165374
Query 63637 AACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63696
| || ||||| ||| ||| || |||||||| || | ||| || || || || |
Sbjct 165375 AGCATGAAGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTG 165434
Query 63697 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 63756
| || | || || | | ||||| || ||||| || || | || |
Sbjct 165435 TGAAAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCCC 165494
Query 63757 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTA 63816
|| || || || |||||||| | ||||||||| |||| ||||| || ||| | |
Sbjct 165495 AGATACCGACAGCAACACGCATGATCATGTGCTGGGGTCGCTCAACGATCTTGCCATCAA 165554
Query 63817 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 63876
||| | | ||||||| | || |||||||| ||||| ||||| | ||| |||||||
Sbjct 165555 GTTTAAGGAGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATATTGGTAGTTGAAGTCTC 165614
Query 63877 GTTCGTAAATAAT 63889
| || || | |||
Sbjct 165615 GGTCATACACAAT 165627
>seq4
Length=2394644
Score = 104 bits (114), Expect = 3e-17
Identities = 113/150 (75%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640
||| |||||||| || ||||||||||||| || | ||||| || || |||||
Sbjct 143657 ACAGGCGAAATCAGTATGGAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAATGTGAG 143598
Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700
|| ||||| ||||||||||| || | ||| || |||||||| || | ||| |||||
Sbjct 143597 ACCTGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGAAGCAAAGGCACCGCTGAAGAA 143538
Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAG 33730
||| ||||| || ||||| ||||||| |||
Sbjct 143537 GATACCTTCGACGGCAGCGAAGGCAACAAG 143508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817009546000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |