Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq16 260 2e-64
seq4 100 4e-16
>seq16
Length=1288267
Score = 260 bits (288), Expect = 2e-64
Identities = 1188/1866 (64%), Gaps = 35/1866 (2%)
Strand=Plus/Plus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
|| ||||| ||||| | | || |||| ||||| || |||||||| || || || |||
Sbjct 163775 GTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTCTTAAGA 163834
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919
||||| |||| ||| |||||||| || || | ||| |||| | || || ||
Sbjct 163835 CCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAG-TCGGGTCTTTCAT 163893
Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979
|| || |||| |||||| ||||| |||||||| || | ||| |||||||| | |
Sbjct 163894 ATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATCTGGAC 163953
Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039
| || |||| |||||||| | ||| || || | || |||||| | || |
Sbjct 163954 AACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCGGGGAT 164013
Query 71040 GTTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096
||||| | ||||| | ||| || || ||||| || | || || || | |||
Sbjct 164014 GTTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGTTCTTCATGGCGTCAGA 164073
Query 71097 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCC 71156
||| || | || | | | | ||||| ||| || || || || || || ||
Sbjct 164074 CCACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTGGAACTCGCC 164133
Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216
|| | ||||| || ||| ||||| || ||||| || | |||| || || ||
Sbjct 164134 AGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTCAAAGCACTCGTTGTTACC 164193
Query 71217 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACC 71276
||| || || | ||| || || ||||| ||||| || | ||||| || | || ||
Sbjct 164194 CAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGTTGCGAATGCC 164253
Query 71277 ATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNN 71336
||| | ||||| || || || ||| |||| | ||||||||| || || ||
Sbjct 164254 ATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGAAGGCTTCACATT 164313
Query 71337 NNNNNNNNNNNNNNNNNNNATGCCGTTAC-TAGCGTATGATCCTGCATATGTATCGTATG 71395
||||| | | || | | || ||| | ||||| |||||
Sbjct 164314 CCACATGTCAAACTGCAGAATGCCTTGAGATACAGGA-GAGCCTTCGTATGTGGAGTATG 164372
Query 71396 GTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGA 71455
| |||| | | ||| || || || | || ||| ||||| || || |
Sbjct 164373 GGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGCATGGTAAATTGTCTCAA 164432
Query 71456 AAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGA-ATA 71514
| |||| ||| || || ||| |||| || || || || || | ||| | |
Sbjct 164433 ATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGACTCGAAAGGC-AGGCGAAGGGCTAGG 164491
Query 71515 AACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATT 71574
||||| ||||| | || |||||||| | ||| || || ||||| | | | || |
Sbjct 164492 AACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGCATGTTGCTGTTC 164551
Query 71575 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATT 71634
| ||||| |||| || || || || | || || || ||||| | |||| || |
Sbjct 164552 TGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAAGTTTCGAACAACA 164611
Query 71635 ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATC----TATT--ACAAAC 71688
|||| | ||||| | || || | || ||| | | || || || | |||||
Sbjct 164612 ACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGCCTTCATTGTAGTCCACAAAG 164671
Query 71689 -ACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTG 71747
||| |||||| | || |||| || || ||||| ||||||| | || || |
Sbjct 164672 GACGG-CAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTCATCGGGGGCGCAGTACTC 164730
Query 71748 TATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTT 71807
|| || || ||||| ||||| | |||||| || | ||| | || || |||||
Sbjct 164731 GATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAGATTCTTCTGGTTGCTCTT 164790
Query 71808 TTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTAT 71867
|| || ||||| || || || || || || | || |||||| |||| | ||||
Sbjct 164791 GCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGTTTCAGTCTGGGCCTCTAG 164850
Query 71868 AATCGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCT--CTT-T 71923
|| || | ||| | | || | ||||| || | |||| | ||| | ||| |
Sbjct 164851 GATGGCATACCAAA-GCTTCTGTGCCTTGATGGT---CTTGCGACCCTTGTTGAGCTTCT 164906
Query 71924 CGTATTGT--GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGT-CTAATCCAGGAC 71980
| || | | ||| | | | ||||||||||| || | ||| | | | || ||||
Sbjct 164907 CATACTTTTCGTAGAGAGCC--TCGAACTCGTCACCGTA-GCAGTCAGCCAGGCCGGGAC 164963
Query 71981 ATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTCGTTTCATAAAGAG 72038
|||| || |||||||||| | ||| || || | || ||| || || ||||| |||||
Sbjct 164964 ATTCGTTGGGACACATCAGAGTCCAATCGCCGT--TCTTTTCAACACGCTTCATGAAGAG 165021
Query 72039 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATT 72098
|||||||||||| || || | || ||||| | | | | || || || || ||
Sbjct 165022 ATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTGCCATGGTT 165081
Query 72099 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 72158
|||| || || | |||| | | | || | |||||| || || | ||| || || |
Sbjct 165082 CTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAGATTGCGAA 165141
Query 72159 AACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 72218
| | || || || ||||| || || ||||| | || | ||| |||||||| | ||||
Sbjct 165142 AGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTGAAGACTCG 165201
Query 72219 CAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGC 72278
|| ||| ||||| | ||| ||||| | |||||||| || | ||| || || ||||
Sbjct 165202 CAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAACCGGTGGC 165261
Query 72279 ACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 72338
||| ||| | || || || || || || ||||| || ||||| | ||| ||
Sbjct 165262 ACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTGCACAGGT 165321
Query 72339 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 72398
|| | || || || |||||||| || || |||||| |||||| | ||| || ||
Sbjct 165322 CTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGAAGCATGA 165381
Query 72399 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 72458
||||| ||| || || |||||||| || | ||| || || || || || || |
Sbjct 165382 AGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTGTGAAAAA 165441
Query 72459 TTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCC 72518
|| |||| | ||||| || ||||| || || | || | || ||
Sbjct 165442 CTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCCCAGATACC 165501
Query 72519 TACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAA 72578
|| || |||||||| | ||| ||||| |||| |||||||||||| || | ||| |
Sbjct 165502 GACAGCAACACGCATGATCATGTGCTGGGGTCGCTCAACGATCTTGCCATCAAGTTTAAG 165561
Query 72579 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 72638
| ||||||| | || |||||||| ||||| ||||| | ||| |||||||| || ||
Sbjct 165562 GAGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATATTGGTAGTTGAAGTCTCGGTCATA 165621
Query 72639 AATAAT 72644
| |||
Sbjct 165622 CACAAT 165627
>seq4
Length=2394644
Score = 100 bits (110), Expect = 4e-16
Identities = 293/444 (66%), Gaps = 8/444 (2%)
Strand=Plus/Minus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|| ||||| || | || || || ||||| || || ||||| || | | || || ||
Sbjct 143947 TTCTGGTAATCGGCGACTCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAGATGTTC 143888
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAA-AT 41892
|||||||| || || || |||| || ||||| | || | | |||| || |
Sbjct 143887 TCCATGAAGTCGAAGGGGTTGGACACCTTATATACCTTCTCGT-TGCCAAGAGCGACCAG 143829
Query 41893 CAATCTATCTGCGATGAATTCTATATATGTTTTCATCATT-TCACAATTCATTCCTATAA 41951
| || ||| || | ||| || ||||| ||||||| || | ||||| || | ||
Sbjct 143828 GAGTCGATCGGCAACGAACTCGATATACTGCTTCATCAGGGTCGCG-TTCATGCCAAGAA 143770
Query 41952 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 42011
| | ||| |||||| | || || || ||||| ||||| ||| ||||| ||||
Sbjct 143769 GACCACATGGCAGAGCCTCGGTCAGGAACTCTTGCTCAATTTTGACAGCGTCAACGATAA 143710
Query 42012 TAGATCTT--ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 42069
| || | || || || || ||| ||| | || || || | | ||| ||
Sbjct 143709 CA--TCCTGGACCACTTGTTTGCTTGGTCGATTCCTCAAGTGAGAGAATAGGAGACAGGC 143652
Query 42070 GAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 42129
|||||| || |||||||| |||| || | |||||||| || ||||| || ||
Sbjct 143651 GAAATCAGTATGGAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAATGTGAGACCTGG 143592
Query 42130 CATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCC 42189
||| ||||||||||| || | ||| || || || ||||| | || |||||||| ||
Sbjct 143591 CATGAGGCCACGCTTCTTCAACCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACC 143532
Query 42190 TTCTACTGCCGCAAAGGCAATAAG 42213
||| || || || ||||||| |||
Sbjct 143531 TTCGACGGCAGCGAAGGCAACAAG 143508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138570807000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |