Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 3e-19
seq4 86.0 1e-12
>seq2
Length=3202410
Score = 107 bits (118), Expect = 3e-19
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||| || || | ||||| | ||||| |||||||| || ||||| |||||||||||
Sbjct 24449 GCTAAGCGCCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACTAAGCCAGCTAT 24391
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || ||||||||||| ||||||||| ||||||
Sbjct 24390 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTG 24350
>seq4
Length=2394644
Score = 86.0 bits (94), Expect = 1e-12
Identities = 121/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| || | ||| | ||| |||||| || || || | |||||
Sbjct 580409 TGATCTACGAAGAGACCCGAGGTGTCCTCAAGTCTTTCCTCGAGGGTGTCATTCGTGATG 580468
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
|| || || ||||||||||| || || ||||| |||||||| |||| ||||||| |
Sbjct 580469 CTGTCACATACACCGAGCACGCCAAGCGAAAGACCGTCACCTCTCTGGACGTCGTCTACG 580528
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
| |||| || || ||||| | | || ||||| || ||||| | |||
Sbjct 580529 CTCTGAAGCGACAGGGCCGAACCCTCTACGGTTTCGGTGGTTAAACATCT 580578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075131426975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |