Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq16 410 3e-109
>seq16
Length=1288267
Score = 410 bits (454), Expect = 3e-109
Identities = 1175/1785 (66%), Gaps = 30/1785 (2%)
Strand=Plus/Minus
Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449
|||||| | || || | |||| ||||||||| | | |||| | || |||||
Sbjct 165595 TTTCGGTTTCAAAACTTTAGAGAGATCCTACCTCCTTAAACTTGATGGCAAGATCGTTGA 165536
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
|| || ||||| ||| | |||||||||||| | |||||| | |||||||
Sbjct 165535 GCGACCCCAGCACATGATCATGCGTGTTGCTGTCGGTATCTGGGGAGACAATGTTGAGCG 165476
Query 363510 CGCGATTGAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCCACGCCAAC 363566
| |||||||| || || ||| | || || || | ||||| || ||| |||||||
Sbjct 165475 AGTCATTGAAACCTACAA-CTTG-ATGTCCAGCAAGTTT-TTCACACATGCCTCGCCAAC 165419
Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626
| | |||||| || || | | | | || ||||||| ||||| || | | |||||
Sbjct 165418 CCTCTTCAATGCGGGCACCCCTCAGGCTCAACTGTCTTCATGCTTCCTAGTCGACATGAA 165359
Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686
||| || ||| ||||| || | ||||| || |||| ||||| | || |||||||
Sbjct 165358 GGATGACAGCATTGAGGGCATTTACGACACCCTCAAGACCTGTGCAATGATCTCCAAGAT 165299
Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA--CAGAACAGTTACATTCGC 363744
|| || || ||||| | |||||| | | ||||| | | || ||||| |||
Sbjct 165298 GGCTGGTGGTATTGGCCTCAACATCCACCGTATCCGTGCCACCGGTTCA--TACAT-CGC 165242
Query 363745 GG-CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
|| ||| || || || || | |||||||||| || || || | || |||||
Sbjct 165241 GGGCACCAATGGCACTTCCAACGGTGTCATTCCCATGCTGCGAGTCTTCAATAACACTGC 165182
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| || || || || ||||| |||||| ||| || || || || || || |||||
Sbjct 165181 TCGTTATGTGGATCAAGGTGGCAACAAGCGCCCAGGCGCTTTCGCAATCTACCTTGAGCC 165122
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
| ||||| || | || ||||| | || ||||| || ||| || || || ||| |
Sbjct 165121 TTGGCATGCGGACGTGTTCGAGTTCATGGACCTCCGAAAGAACCATGGCAAGGAAGAAGT 165062
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
|| ||||||||||| ||| || || ||| || |||| | || |||||||| || ||
Sbjct 165061 TCGCGCACGTGATCTCTTCCTCGCCCTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGA 165002
Query 363984 GGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTA 364041
| | | | ||||| | || | || || |||||||||| || || | ||
Sbjct 165001 A--AAGAACGGCGATTGGACTCTGATGTGTCCCAACGAATGTCCCGGCCTGGCTGACTGC 164944
Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101
| |||||||| | | ||||| |||||||||||||| | |||| ||| |||
Sbjct 164943 TACGGTGACGAGTTCGAGGCTCTCTACGAAAAGTATGAGAAGCTCAACAAGGGTCGCAAG 164884
Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161
|| || ||||||||||| |||| ||||||| | || | |||| ||| || |||| |
Sbjct 164883 ACCATCAAGGCACAGAAGCTTTGGTATGCCATCCTAGAGGCCCAGACTGAAACCGGAA-A 164825
Query 364162 CCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220
|||| | ||| | ||||||||| | ||||| |||||| ||||||| || | ||||| ||
Sbjct 164824 CCCTTTCATGCTCTACAAAGATGCTTGCAATCGCAAGAGCAACCAGAAGAATCTTGGCAC 164765
Query 364221 AATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279
| || |||| ||| || || || ||||| || || ||| ||| ||||| ||| |
Sbjct 164764 CA-TCCGCAGCTCCAATCTCTGCACGGAGATCATCGAGTACTGCGCCCCCGATGAGGTCG 164706
Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGGTACTT 364333
|||| || ||| | || ||| | || | ||| | ||||| || || || |
Sbjct 164705 CCGTCTGCAACTTGGCTTCGCTGGCCTTGCCGTCCTTTGTGGACTACAATGAAGGCTGCT 164646
Query 364334 TTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTA 364393
|||| ||| | || | || || ||| | || | | | || | | ||| | |
Sbjct 164645 ATGACTTCCAAAAGCTGCACGATGTTACCGAAGTTGTTGTTCGAAACTTGAATAAGATCA 164586
Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGA 364453
||||| || || || || |||| ||||| || || ||||| || | || |
Sbjct 164585 TCGACGTCAACTACTACCCCGTTCCGGAAGCACAGAACAGCAACATGCGCCACAGGCCCA 164526
Query 364454 TTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATT 364513
||||| | || || ||||| || || || | || | || || | || || |
Sbjct 164525 TTGGTGTCGGCGTTCAGGGTCTTGCAGATGCGTTCCTAGCCCTTCGCCTGCCTTTCGAGT 164466
Query 364514 CGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGA 364573
| ||||| || || | || || ||| |||| ||||| ||||| || |||||| | |
Sbjct 164465 CTCCTGAGGCACGAGAGCTGAACAAGCAGATATTTGAGACAATTTACCATGCCGCTCTCA 164406
Query 364574 CTGCTT-CGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632
|||||| | || ||| ||| | ||||| | ||||| || || || || || |||
Sbjct 164405 CTGCTTCCATGGAGCTTGCCAAGGAGCAAGGCCCA-TACTCCACATACGAAGGCTCTCCT 164347
Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692
| || || || | | |||||||| | |||||||| | ||| || | | ||| ||
Sbjct 164346 GTATCTCAAGGCATTCTGCAGTTTGACATGTGGAATGTGAAGCCTTCCGATCTTTGGGAC 164287
Query 364693 TGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGC 364751
|||| |||| | | ||| | ||| |||||| | ||||||| || | |||
Sbjct 164286 TGGGCATCGCTGAAGGAGCAA-ATCAAGGCGCATGGCATTCGCAACAGTCTGCTAGTAGC 164228
Query 364752 GCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTT 364811
|| ||||| || || |||| | |||||| | || |||||||||||||| || ||||
Sbjct 164227 ACCAATGCCTACCGCCAGTACTTCCCAGATCTTGGGTAACAACGAGTGCTTTGAGCCGTA 164168
Query 364812 TACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTA 364871
||| |||| | || |||| | || ||| | || || || | ||| || || |
Sbjct 164167 CACATCCAATATCTACCAACGCAGAGTCCTTGCTGGCGAGTTCCAGGTCGTCAACCCTTG 164108
Query 364872 CCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCAT 364931
|| | |||||||| ||| || ||||| |||| |||||||||| ||||||
Sbjct 164107 GCTCCTAAAGGATCTGGTTGACATGGGCTTGTGGTCTGACGCCATGAAGAACCGTATCAT 164048
Query 364932 CGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTA 364991
|| | || || || || |||||||||||| | || | |||| | || | | ||
Sbjct 164047 TGCTGAAAACGGCTCCGTCCAGAACATTCCAAACATCCCCGCAGATATCAAAGCCCTCTA 163988
Query 364992 CAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGC 365051
||| || || |||||||| || ||| ||| | | | ||||| ||||| ||||||||
Sbjct 163987 CAAGACTGTCTGGGAAATCTCACAGCGTACTGTTGTCCAGATGGCTGCCGACCGCGGTGC 163928
Query 365052 TTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCT 365111
|| || |||| ||||| || ||| | |||| | || || | |||| |
Sbjct 163927 CTTCATTGATCAGTCTCAGTCCTTGAACATCCATATGAAAGACCCGACTATGGGCAAGAT 163868
Query 365112 TACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|| |||||||||| ||| ||||| |||||||||||| ||
Sbjct 163867 CACCAGCATGCATTTCGCCGGCTGGAAGCTCGGTCTTAAGACCGG 163823
Score = 87.8 bits (96), Expect = 5e-12
Identities = 127/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Plus
Query 111732 TGCCAAATGTATCAGCGAT-CTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAG 111790
|| ||| |||||||||||| |||| ||||| |||||||| ||||| || |||||||||||
Sbjct 729513 TGTCAATTGTATCAGCGATCCTGC-GATATGGGTCTTGGCGTTCCATTCAATATTGCAAG 729571
Query 111791 TTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCAT 111850
||||||||||| || | | ||||||| || |||| || || | |
Sbjct 729572 CTACGCACTACTGACACACATGCTCGCTCACGTTTGCGATCTGGTGCCTGGAAGCCTTAC 729631
Query 111851 TCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGATGCACTTAAAACACA 111907
||||| || ||||| ||||| || || | ||||| | ||||| || || || ||
Sbjct 729632 ACACGTCATGGGAGACGCGCACGTCTATATCGACCACGTCGATGCTCTAAAGACCCA 729688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352347558650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |