Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq16 152 5e-32
seq25 136 4e-27
seq10 105 6e-18
>seq16
Length=1288267
Score = 152 bits (168), Expect = 5e-32
Identities = 729/1137 (64%), Gaps = 55/1137 (5%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| |||||||| || | || | || || | || || ||| | ||
Sbjct 164114 TTGACGACCTGGAACTCGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGC 164173
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
||||| ||||||| || |||| ||| || | || | ||||| ||||| || ||
Sbjct 164174 TCAAAGCACTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACT 164233
Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235
| | | || ||||| | ||| ||| |||||| | ||||| |||| |||| ||||
Sbjct 164234 AGCAGACTG--TTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCC 164291
Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295
| || | ||| |||| | ||||||||| |||||| |||||| | | ||
Sbjct 164292 AAAGATCGGAAGGCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAG 164351
Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTC---GCAACTCGCCTC 145350
||||| | | ||| || || | | ||||| ||||| | || ||
Sbjct 164352 AGCCTTCGTATGTGGAGTA--TGGGCCTTGCTCCTTGGCAAGCTCCATGGAA---GCAGT 164406
Query 145351 CAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCT 145410
|||||| | ||||||||||| || ||| |||| ||| || |||
Sbjct 164407 GAGAGCGGCATGGTAAATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGA 164466
Query 145411 CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470
|||| | |||| ||| || || || ||||| || || ||||| | || || || ||
Sbjct 164467 CTCGAAAGGCAGGCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAAT 164526
Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGA 145529
||||| || ||||||||| || || | | || || | | | ||| ||||
Sbjct 164527 GGGCCTGTGGCGCATGTTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACG-TCGA 164585
Query 145530 TAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAA 145589
| || |||||||||||||| || || || | |||| | ||| ||||| ||||||
Sbjct 164586 TGATCTTATTCAAGTTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCAT 164645
Query 145590 ACCGAGCCT-CGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACT 145648
| | ||||| | | | ||||| || | ||| | ||| ||||| || || ||
Sbjct 164646 AGC-AGCCTTCATTGTAGTCCACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACG 164704
Query 145649 GCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATG 145708
|| ||| |||| | ||| ||| | | |||||| | ||| | |||| | ||||
Sbjct 164705 GCGACCTCATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATG 164764
Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768
|| || ||||| | ||| || || || | ||||| || || |||||||||||| | ||
Sbjct 164765 GTGCCAAGATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGG 164824
Query 145769 CCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGC--AAG-TCCTGCGCACGCACC 145825
|| || || ||| | ||| | ||| | | | ||| | ||| || |
Sbjct 164825 TTTCCGGTTTCAGTCTGGGCCTCTAGGATGGCA---TACCAAAGCTTCTGTGC-----CT 164876
Query 145826 TGCTGCTGGTAGCGGCCCT-------CTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGC 145878
|| || | | ||| |||| ||||| | || || |||||| |||| ||| |
Sbjct 164877 TGATGGTCTT-GCGACCCTTGTTGAGCTTCT-CATACTTTTCGTAGAGAGCCTCGAACTC 164934
Query 145879 GGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCC 145938
| ||||||||| || | |||||||||||| | ||||||||||||||| | ||| ||||
Sbjct 164935 GTCACCGTAGCAGTCAGCCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCC 164994
Query 145939 GTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCG-----TACATCAAG 145993
||| | || |||| ||| || | ||| || | |||||| ||| | |||| |
Sbjct 164995 GTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACG 165054
Query 145994 TCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATT--AAGCACACTATAGA 146051
| ||||| | | |||| ||||| ||| | | | | | || | | | |
Sbjct 165055 T-GCGCGAACTTC-TTCCT----TGCCATGGTTCTTTCGGAGGTCCATGAACTCGA-ACA 165107
Query 146052 TGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCT 146108
|||||| ||||| || |||| |||| |||| || ||| || |||||||| |
Sbjct 165108 CGTCCGCATGCCAAGGCTCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTT 165167
Query 146109 GGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGG 146165
| ||||| | ||| | |||| || ||||| |||| |||||| ||| ||| |||
Sbjct 165168 GATCCACATAACGAGCAGTGTTATTGAAGACTCGCAGCATGGGAATGACACCGTTGG 165224
>seq25
Length=449666
Score = 136 bits (150), Expect = 4e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || || | ||||||||| | || | ||||||||||| ||||||||||||||
Sbjct 296602 GCCTCCTCGTAGACGCAGCACCAGGTGCAAAGTCGACTCCTTCTGAATGTTGTAATCAGA 296543
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| || |||||| ||||||||||| ||| |||| || ||||| ||||| || ||
Sbjct 296542 TAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGCGG 296483
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 296482 GATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 296423
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|||| ||| | || || || || || ||||| ||||| ||||||||||
Sbjct 296422 CTCGAGGGTGATAGTCTTCCCCGTAAGGGTTTTGACGAAGATCTGCATGA 296373
>seq10
Length=1675152
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | || || || | ||| | ||| |||||||| ||||||||||| ||
Sbjct 200244 GCCACCACGAAGGCGGAGGACGAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCCGA 200185
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || |||||| | ||||||||| ||| |||| | ||||||||||| || ||
Sbjct 200184 GAGCGTTCGACCGTCCTCCAACTGCTTGCCCGCGAAGATGAGTCGCTGCTGGTCTGGTGG 200125
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| || || ||| | | || | ||||||| ||||| |
Sbjct 200124 GATGCCCTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATGGTATCGGATGACTCAAC 200065
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | || || ||||| || || || ||||| ||||||||
Sbjct 200064 CTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 200017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012357488000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |