Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02- 10] 75 sequences; 42,602,674 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq16 152 5e-32 seq25 136 4e-27 seq10 105 6e-18 >seq16 Length=1288267 Score = 152 bits (168), Expect = 5e-32 Identities = 729/1137 (64%), Gaps = 55/1137 (5%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| || | || | || || | || || ||| | || Sbjct 164114 TTGACGACCTGGAACTCGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGC 164173 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| || |||| ||| || | || | ||||| ||||| || || Sbjct 164174 TCAAAGCACTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACT 164233 Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || ||||| | ||| ||| |||||| | ||||| |||| |||| |||| Sbjct 164234 AGCAGACTG--TTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCC 164291 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | || | ||| |||| | ||||||||| |||||| |||||| | | || Sbjct 164292 AAAGATCGGAAGGCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAG 164351 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTC---GCAACTCGCCTC 145350 ||||| | | ||| || || | | ||||| ||||| | || || Sbjct 164352 AGCCTTCGTATGTGGAGTA--TGGGCCTTGCTCCTTGGCAAGCTCCATGGAA---GCAGT 164406 Query 145351 CAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCT 145410 |||||| | ||||||||||| || ||| |||| ||| || ||| Sbjct 164407 GAGAGCGGCATGGTAAATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGA 164466 Query 145411 CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470 |||| | |||| ||| || || || ||||| || || ||||| | || || || || Sbjct 164467 CTCGAAAGGCAGGCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAAT 164526 Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGGTCGA 145529 ||||| || ||||||||| || || | | || || | | | ||| |||| Sbjct 164527 GGGCCTGTGGCGCATGTTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACG-TCGA 164585 Query 145530 TAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAA 145589 | || |||||||||||||| || || || | |||| | ||| ||||| |||||| Sbjct 164586 TGATCTTATTCAAGTTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCAT 164645 Query 145590 ACCGAGCCT-CGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACT 145648 | | ||||| | | | ||||| || | ||| | ||| ||||| || || || Sbjct 164646 AGC-AGCCTTCATTGTAGTCCACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACG 164704 Query 145649 GCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATG 145708 || ||| |||| | ||| ||| | | |||||| | ||| | |||| | |||| Sbjct 164705 GCGACCTCATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATG 164764 Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768 || || ||||| | ||| || || || | ||||| || || |||||||||||| | || Sbjct 164765 GTGCCAAGATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGG 164824 Query 145769 CCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGC--AAG-TCCTGCGCACGCACC 145825 || || || ||| | ||| | ||| | | | ||| | ||| || | Sbjct 164825 TTTCCGGTTTCAGTCTGGGCCTCTAGGATGGCA---TACCAAAGCTTCTGTGC-----CT 164876 Query 145826 TGCTGCTGGTAGCGGCCCT-------CTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGC 145878 || || | | ||| |||| ||||| | || || |||||| |||| ||| | Sbjct 164877 TGATGGTCTT-GCGACCCTTGTTGAGCTTCT-CATACTTTTCGTAGAGAGCCTCGAACTC 164934 Query 145879 GGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCC 145938 | ||||||||| || | |||||||||||| | ||||||||||||||| | ||| |||| Sbjct 164935 GTCACCGTAGCAGTCAGCCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCC 164994 Query 145939 GTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCG-----TACATCAAG 145993 ||| | || |||| ||| || | ||| || | |||||| ||| | |||| | Sbjct 164995 GTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACG 165054 Query 145994 TCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATT--AAGCACACTATAGA 146051 | ||||| | | |||| ||||| ||| | | | | | || | | | | Sbjct 165055 T-GCGCGAACTTC-TTCCT----TGCCATGGTTCTTTCGGAGGTCCATGAACTCGA-ACA 165107 Query 146052 TGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCT 146108 |||||| ||||| || |||| |||| |||| || ||| || |||||||| | Sbjct 165108 CGTCCGCATGCCAAGGCTCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTT 165167 Query 146109 GGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGG 146165 | ||||| | ||| | |||| || ||||| |||| |||||| ||| ||| ||| Sbjct 165168 GATCCACATAACGAGCAGTGTTATTGAAGACTCGCAGCATGGGAATGACACCGTTGG 165224 >seq25 Length=449666 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||||||||| | || | ||||||||||| |||||||||||||| Sbjct 296602 GCCTCCTCGTAGACGCAGCACCAGGTGCAAAGTCGACTCCTTCTGAATGTTGTAATCAGA 296543 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| ||||||||||| ||| |||| || ||||| ||||| || || Sbjct 296542 TAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGCGG 296483 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 296482 GATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 296423 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 |||| ||| | || || || || || ||||| ||||| |||||||||| Sbjct 296422 CTCGAGGGTGATAGTCTTCCCCGTAAGGGTTTTGACGAAGATCTGCATGA 296373 >seq10 Length=1675152 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || || || | ||| | ||| |||||||| ||||||||||| || Sbjct 200244 GCCACCACGAAGGCGGAGGACGAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCCGA 200185 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| | ||||||||| ||| |||| | ||||||||||| || || Sbjct 200184 GAGCGTTCGACCGTCCTCCAACTGCTTGCCCGCGAAGATGAGTCGCTGCTGGTCTGGTGG 200125 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || || ||| | | || | ||||||| ||||| | Sbjct 200124 GATGCCCTCCTTGTCTTGAATCTTGGACTTTACGTTATCGATGGTATCGGATGACTCAAC 200065 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || ||||| |||||||| Sbjct 200064 CTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 200017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012357488000