Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq16 269 3e-67
seq4 105 8e-18
>seq16
Length=1288267
Score = 269 bits (298), Expect = 3e-67
Identities = 1191/1874 (64%), Gaps = 35/1874 (2%)
Strand=Plus/Plus
Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909
||||| || ||||| || | || | || ||||| || ||||||||||| || || |||
Sbjct 163775 GTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTCTTAAGA 163834
Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969
||||| |||| ||| |||||||| || || | ||| | |||| ||| |||
Sbjct 163835 CCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTCGGGTCTTTCATA 163894
Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029
||||| |||| || ||| ||||| |||||||| || | ||| |||||||| | | |
Sbjct 163895 TGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATCTGGACA 163954
Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089
| || |||| |||||||| | ||| || || | || |||||| | || | |
Sbjct 163955 ACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCGGGGATG 164014
Query 62090 TTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146
|||| | ||||| | ||| || || || || || | ||||| || | ||| |
Sbjct 164015 TTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGTTCTTCATGGCGTCAGAC 164074
Query 62147 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62206
|| || | || | | | | ||||| || || || || || || || |||
Sbjct 164075 CACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTGGAACTCGCCA 164134
Query 62207 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 62266
| | ||||| || ||| ||||| || ||||| || | |||| || || |||
Sbjct 164135 GCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTCAAAGCACTCGTTGTTACCC 164194
Query 62267 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62326
|| || || | ||| || || ||||| ||||| || | | ||| || | || ||
Sbjct 164195 AAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGTTGCGAATGCCA 164254
Query 62327 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 62386
| | |||||| || || || | | |||| | ||||||||| || || ||
Sbjct 164255 TGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGAAGGCTTCACATTC 164314
Query 62387 NNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTATCGTA 62442
|| ||||| || | ||| || | | ||| | ||||| |||
Sbjct 164315 CACATGTCAAACTGCAGAATGCCTTGAGATACAGGAG----AGCCTTCGTATGTGGAGTA 164370
Query 62443 TGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 62502
||| |||| || || || || || || | || | | ||||| || ||
Sbjct 164371 TGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGCATGGTAAATTGTCTC 164430
Query 62503 GAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTA-TCAAATGGATAATTTAAGAGA- 62560
|| |||| ||| || || ||| | || || ||| | || || || | ||| |
Sbjct 164431 AAATATCTGCTTGTTCAGCTCTCGTGCCTC-AGGAGACTCGAAAGGC-AGGCGAAGGGCT 164488
Query 62561 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62620
| ||||| ||||| | || ||||| || | ||| || || || || | | | || |
Sbjct 164489 AGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGCATGTTGCTG 164548
Query 62621 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 62680
| | ||||| |||| || || || || | || || || ||||| | |||| |||
Sbjct 164549 TTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAAGTTTCGAACA 164608
Query 62681 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC----TATTACAAA 62736
| |||| | ||||| | ||| || | || ||| | | || || || | || |
Sbjct 164609 ACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGCCTTCATTGTAGTCCACA 164668
Query 62737 CATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TA 62793
| | ||| || | || |||| || || ||||| ||||||| | | ||| ||
Sbjct 164669 AAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTCATCGGGGGC-GCAGTA 164727
Query 62794 TTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACT 62853
| || ||||| ||||| ||||| | |||||| || | ||| | || || ||
Sbjct 164728 CTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAGATTCTTCTGGTTGCT 164787
Query 62854 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 62913
||| || || ||||| || || || ||||| || | || |||||| |||| | ||
Sbjct 164788 CTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGTTTCAGTCTGGGCCTC 164847
Query 62914 TATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTT-TTCTCTT 62971
|| || || | ||| | | || | ||||| || | ||| | ||| || |
Sbjct 164848 TAGGATGGCATACCAAA-GCTTCTGTGCCTTGATGGTC---TTGCGACCCTTGTTGAGCT 164903
Query 62972 TCGTATAGT----GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGG 63027
|| ||| | ||| | | | ||||||||||| || | | |||| || ||
Sbjct 164904 TCTCATACTTTTCGTAGAGAGCC--TCGAACTCGTCACCGTAGCAGTCAGCCAGGCCGGG 164961
Query 63028 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 63087
|||||| | |||||||||| | ||| || |||| | | || || ||||| |||||
Sbjct 164962 ACATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTCAACACGCTTCATGAAGAG 165021
Query 63088 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 63147
|||||||||||| || || | || ||||| | | | | ||| || || || ||
Sbjct 165022 ATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTGCCATGGTT 165081
Query 63148 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63207
|||| || || | |||| | | | || | |||||| || || | ||| || || |
Sbjct 165082 CTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAGATTGCGAA 165141
Query 63208 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63267
| | || || || ||||| || || ||||| | || | ||| |||||||| | ||||
Sbjct 165142 AGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTGAAGACTCG 165201
Query 63268 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGC 63327
|| ||| ||||| | ||| ||||| || |||||||| || | ||| || || ||||
Sbjct 165202 CAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAACCGGTGGC 165261
Query 63328 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63387
||| ||| || || || || || || ||||| || ||||| | ||| ||
Sbjct 165262 ACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTGCACAGGT 165321
Query 63388 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 63447
|| | || || || |||||||| || || |||||| |||||| | ||| || ||
Sbjct 165322 CTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGAAGCATGA 165381
Query 63448 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCA 63507
||||| ||| || || |||||||| || | ||| || || || || || || |
Sbjct 165382 AGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTGTGAAAAA 165441
Query 63508 TTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 63567
|| || | | ||||| || ||||| || || | || | || ||
Sbjct 165442 CTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCCCAGATACC 165501
Query 63568 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA 63627
|| || |||||||| | ||||||||| |||| |||||||||||| | | ||| |
Sbjct 165502 GACAGCAACACGCATGATCATGTGCTGGGGTCGCTCAACGATCTTGCCATCAAGTTTAAG 165561
Query 63628 CAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTA 63687
| ||||||| | || |||||||| ||||| ||||| | ||| |||||||| || ||
Sbjct 165562 GAGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATATTGGTAGTTGAAGTCTCGGTCATA 165621
Query 63688 AATAATAACCGAGT 63701
| ||| | ||||
Sbjct 165622 CACAATGGCGGAGT 165635
>seq4
Length=2394644
Score = 105 bits (116), Expect = 8e-18
Identities = 294/444 (66%), Gaps = 8/444 (2%)
Strand=Plus/Minus
Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429
|| ||||| || | || || || ||||| || || || || || | | || || ||
Sbjct 143947 TTCTGGTAATCGGCGACTCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAGATGTTC 143888
Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAA-AT 32488
|||||||| ||||| || |||| || ||||| | || | | |||| || |
Sbjct 143887 TCCATGAAGTCGAAGGGGTTGGACACCTTATATACCTTCTCGT-TGCCAAGAGCGACCAG 143829
Query 32489 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATT-TCACAATTCATTCCTATAA 32547
| || ||| || || || || ||||| ||||||| || | ||||| || | ||
Sbjct 143828 GAGTCGATCGGCAACGAACTCGATATACTGCTTCATCAGGGTCGCG-TTCATGCCAAGAA 143770
Query 32548 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 32607
| | ||| |||||| | || || || ||||| ||||| ||| ||||| ||||
Sbjct 143769 GACCACATGGCAGAGCCTCGGTCAGGAACTCTTGCTCAATTTTGACAGCGTCAACGATAA 143710
Query 32608 TAGATCTT--ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 32665
| || | || || || || ||| ||| | || || || | | ||| ||
Sbjct 143709 CA--TCCTGGACCACTTGTTTGCTTGGTCGATTCCTCAAGTGAGAGAATAGGAGACAGGC 143652
Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725
|||||| || ||||||||||||| || | |||||||| || ||||| || ||
Sbjct 143651 GAAATCAGTATGGAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAATGTGAGACCTGG 143592
Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785
||| ||||||||||| || | ||| || ||||| ||||| | || ||||| || ||
Sbjct 143591 CATGAGGCCACGCTTCTTCAACCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACC 143532
Query 32786 TTCTACTGCCGCAAAGGCAATAAG 32809
||| || || || ||||||| |||
Sbjct 143531 TTCGACGGCAGCGAAGGCAACAAG 143508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631405970000
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