Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq16 215 5e-51
>seq16
Length=1288267
Score = 215 bits (238), Expect = 5e-51
Identities = 342/486 (70%), Gaps = 6/486 (1%)
Strand=Plus/Minus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
||| | || ||||| ||||| ||||| ||||| | | || ||||||| || |||||
Sbjct 165429 GCCTCGCCAACCCTCTTCAATGCGGGCACCCCTCAGGCTCAACTGTCTTCATGCTTCCTA 165370
Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010
| ||| | |||| ||| ||| || |||| ||||| ||||||| |||||| |
Sbjct 165369 GTCGAC-ATGAAGGATGACAGCATTGAGGGCATTTACGACACCCTCAAGACCTGTGCAAT 165311
Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGT 94068
||||| || || || || || || ||| ||||| |||| ||||||| |||
Sbjct 165310 GATCTCCAAGATGGCTGGTGGTATTGGCCTCAACATCCAC--CGTATCCGTGCCACCGGT 165253
Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128
|| |||||| || ||||||||||| |||||||| || | || ||||| || ||||||
Sbjct 165252 TCATACATCGCGGGCACCAATGGCACTTCCAACGGTGTCATTCCCATGCTGCGAGTCTTC 165193
Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188
|| ||| | || || || ||||| || ||||| | | | || ||||||| ||
Sbjct 165192 AATAACACTGCTCGTTATGTGGATCAAGGTGGCAACAAGCGCCCAGGCGCTTTCGCAATC 165133
Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248
|| || ||||| ||||| ||||||||| | ||||| ||||| ||||||||||| |||
Sbjct 165132 TACCTTGAGCCTTGGCATGCGGACGTGTTCGAGTTCATGGACCTCCGAAAGAACCATGGC 165073
Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| || | | || | || |||||| ||| || ||| | || || || || |||
Sbjct 165072 AAGGAAGAAGTTCGCGCACGTGATCTCTTCCTCGCCCTGTGGATTCCTGATCTCTTCATG 165013
Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTG 94368
|| || || || || ||| || |||| ||| | |||||||| ||||||||||| |||
Sbjct 165012 AAGCGTGTTGAAAAGAACGGCGATTGGACTCTGATGTGTCCCAACGAATGTCCCGGCCTG 164953
Query 94369 TCCGAC 94374
| |||
Sbjct 164952 GCTGAC 164947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722736197000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |