Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq16 167 3e-36
seq4 105 8e-18
>seq16
Length=1288267
Score = 167 bits (184), Expect = 3e-36
Identities = 1167/1860 (63%), Gaps = 65/1860 (3%)
Strand=Plus/Plus
Query 115519 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 115578
|||| | ||||||| ||||| ||| || | | |||||||||||||| || |||
Sbjct 163769 TCAACGGTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTC 163828
Query 115579 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT 115638
|| || || |||||||| | | |||||| || | |||| | || || |
Sbjct 163829 TTAAGACCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTCGGGTCT 163888
Query 115639 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 115698
| ||| || ||||| || || ||||| |||||| || || || || |||||
Sbjct 163889 TTCATATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATC 163948
Query 115699 TCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 115758
| | ||| | ||||||||| ||||| |||||||| || ||||| |
Sbjct 163949 TGGACAACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCG 164008
Query 115759 GGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCA-TGAGA---TCCTTCAT 115814
||||| | || || |||| ||||| | || | || ||| | | ||||||
Sbjct 164009 GGGATGTTTGGAATGTTCTGGACGGAGCC----GTTTTCAGCAATGATACGGTTCTTCAT 164064
Query 115815 ATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAAC 115874
| | ||||| | || || | ||||||| | ||| ||||| ||
Sbjct 164065 GGCGTCAGACCACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTG 164124
Query 115875 AAACTCACCCGCGAGGG---TGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCA 115931
||||| || || ||| ||||| | ||||| |||| ||||| |||||||||||
Sbjct 164125 GAACTCGCCAGCAAGGACTCTGCGTT---GGTAGATATTGGATGTGTACGGCTCAAAGCA 164181
Query 115932 CTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 115991
||| |||||||||||||| |||| || ||| || ||||| ||||| | || || ||
Sbjct 164182 CTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACT 164241
Query 115992 GTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGC-T 116050
|||||| | || | || | || | ||||| || | ||||||| | || |
Sbjct 164242 GTTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCA-AAGATCGG 164300
Query 116051 TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 116110
| || | | | |||||| |||||||| || || ||||| || | || || || ||
Sbjct 164301 AAGGCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAGAGCCTTCGT 164360
Query 116111 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 116170
|||| |||||||| | ||| || | || | || ||| || || || |
Sbjct 164361 ATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGCATGGT 164420
Query 116171 ACATTGTCTCAAAAATGCGAGCATTCATTGC-CTTG-GCCTCGTCGGAATCAAACGCGAG 116228
| ||||||||||| || | |||| || || | ||||| || || || | ||
Sbjct 164421 AAATTGTCTCAAATATCTGCTTGTTCA--GCTCTCGTGCCTCAGGAGACTCGAAAGGCAG 164478
Query 116229 ACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 116288
|| | || |||| || ||||| || || |||| ||||| || | || |
Sbjct 164479 GCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCG 164538
Query 116289 CATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAG 116348
||| || || | || | ||||| || | || ||||| | | |||| |
Sbjct 164539 CATGTTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAA 164598
Query 116349 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 116408
||| ||||| | || | || || ||||||| | | ||| | | || |
Sbjct 164599 GTTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGC------C 164652
Query 116409 TTCATTG------ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 116462
||||||| ||| | || | ||| | || |||| || || || | | |||
Sbjct 164653 TTCATTGTAGTCCACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTC 164712
Query 116463 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 116522
||| | |||||| || || ||||| || | ||| || || |||||||| |
Sbjct 164713 ATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAG 164772
Query 116523 GTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGT 116582
||||| || || ||| || || ||||| ||||||||||| | || | || ||
Sbjct 164773 ATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGT 164832
Query 116583 CTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGG 116641
|| || |||| || || || || | ||| | | || | | || | ||| |||
Sbjct 164833 TTCAGTCTGGGCCTCTAGGATGGCATACCAAAGCTTCTGTGCCTTG----ATGGTCTTG- 164887
Query 116642 CTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAG 116695
|| |||| || ||| |||||| |||||| ||||| ||||| ||| || ||
Sbjct 164888 --CGACCCTTGTTGAGCTTCTCATACTTTTCGTAGAGAGCCTCGAACTCGTCA-CCGTAG 164944
Query 116696 C-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCA 116754
| || | || || || | | ||||| | |||| ||| | || || |||
Sbjct 164945 CAGTCAGCCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTCA 165004
Query 116755 ACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCT 116814
|| |||||||||||||| || || ||||| || || ||||||||| || |||| ||
Sbjct 165005 ACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACT 165064
Query 116815 TCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGT 116874
||||| | || || || || | |||| || || | | ||||| ||||| ||
Sbjct 165065 TCTTCCTTGCCATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGC 165124
Query 116875 TCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCC 116931
|| ||||| | |||| | || ||| ||| | || | ||||| | ||
Sbjct 165125 TCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCA 165184
Query 116932 GTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCG 116990
|| || || || || ||||| ||||||| ||| | || |||||| || ||| ||
Sbjct 165185 GTGTTATTGAAGACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCG 165244
Query 116991 A-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACT 117049
| || || || | |||| | || | |||||||| | |||||||| || ||| ||
Sbjct 165245 ATGTATGA-AC-CGGTGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCT 165302
Query 117050 TTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTAT 117109
| ||||| ||| || | |||| || |||| || || || || |||| ||||
Sbjct 165303 TGGAGATCATTGCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCA 165362
Query 117110 TTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTG 117169
| ||| |||||||| |||| ||| | | || || || || |||||||||||||
Sbjct 165363 TGTCGACTAGGAAGCATGAAGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTG 165422
Query 117170 GTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACAGAGGG 117227
| | || || ||| | | |||| ||||||| | |||||| || | |||
Sbjct 165423 GCGAGGCATGTGTGA--AAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTC 165480
Query 117228 AA---TGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTC 117284
|| ||||| ||| | ||||||| | || ||||| | ||||| |||||| ||
Sbjct 165481 AACATTGTCTCCCCAG---ATACCGACAGCAACACGCATGATCATGTGCTGGGGTCGCTC 165537
Query 117285 CATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 117344
| | | ||||| || | ||||||| |||| || || |||| ||| |||||
Sbjct 165538 AACGATCTTGCCATCAAGTTTAAGGAGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATA 165597
>seq4
Length=2394644
Score = 105 bits (116), Expect = 8e-18
Identities = 112/148 (76%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591
|||||||||||||| || |||||||| || || ||||| |||||||||||||| ||
Sbjct 143641 TGGAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAATGTGAGACCTGGCATGAGGCCA 143582
Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651
||||||||||||||||| || | | ||| | || ||||||||| || || ||
Sbjct 143581 CGCTTCTTCAACCAGAAGATGGAAGCAAAGGCACCGCTGAAGAAGATACCTTCGACGGCA 143522
Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGG 127679
||||| |||| ||||| | || ||||
Sbjct 143521 GCGAAGGCAACAAGACGTTGAGCGAAGG 143494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506624837000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |