Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02- 10] 75 sequences; 42,602,674 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 385 6e-102 seq10 141 1e-28 seq6 131 2e-25 >seq2 Length=3202410 Score = 385 bits (426), Expect = 6e-102 Identities = 1050/1599 (66%), Gaps = 39/1599 (2%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGAC--CATCTTTTCAATGTCTTCTTTCG 6626 ||||| ||||| || ||||| || || || |||| ||| || || || || || | Sbjct 682884 TCATCCTCATCCTTGTACTTCTCGGCTTC--GGACAACATGCGCTCGATATCCTCCTTGG 682827 Query 6627 ATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686 | | | ||||| || || || || |||||| | ||| || || | | |||| || Sbjct 682826 ACAGGCGTCCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTGCCGGTGCCCTTCTCGA 682767 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 || || |||| |||||||| ||||||| |||||| | || | || || || Sbjct 682766 TGGCGGAAACGTTCATGATACCATTGGCATCAAGATCGAAGGTGACCTCGATCTGAGGAA 682707 Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 ||| | ||||| | ||| || || || | || || | || || | |||| ||| Sbjct 682706 CACCTCGGGGTGCAGGTGGGATGCCGGTAAGCTCGAACTTGCCGAGAAGGTTGTTGTCCT 682647 Query 6807 TCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTG 6866 | | || ||| ||||| || ||||| | || ||| |||| || || ||| Sbjct 682646 TGGTGCGCTGACGCTCACCCTCGTAGACCTGGATGAGCACACCAGGCTGGTTGTCTGAGA 682587 Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926 || ||||||| | ||||| | || || || || |||| ||| || | | || Sbjct 682586 AGGTAGAGAAGACCTCGGACTTCTTGGTAGGGATAGTGGTGTTTCGCGGGATGAGCTTGG 682527 Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 |||| || ||||| ||| |||| || ||||| || || | || || | || || | Sbjct 682526 TCATCATGCCACCAGCAGTCTCGATACCGAGAGAGAGCGGGGCAACATCGAGAAGCAAGA 682467 Query 6987 GGTCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGAC 7035 ||| | | |||||||| |||| | ||||||||||| ||||| Sbjct 682466 --TCTCGC------TGGTTCCCTTGGAGGAGGTGTCACCAGACAAGATGGCGGCCTGGAC 682415 Query 7036 CGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTT 7095 | || ||||| || || |||||||||||||| || | || || | || || ||||| Sbjct 682414 AGCGGCGCCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTT 682355 Query 7096 AAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAAC 7155 || || || | | | | || ||| ||||| || || || || ||||| | || Sbjct 682354 GAAGTAGTCGGTGATGAGCTTCTGGATTCGGGGGATACGGGTGGAACCGCCGACAAGGAC 682295 Query 7156 GATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGA-AGTGTTTTTTCGACAGGTT 7214 ||| || | || | || || |||||||| | || ||| || |||||||| | Sbjct 682294 GATCTCGTGGACCTGGGACTTGTCGATCTTGGCATC-CGAGAGGACACGGTCGACAGGCT 682236 Query 7215 CCA---TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGG 7271 | | || ||||| | ||| |||| || || || || || ||||| |||| Sbjct 682235 GGAGGGTGGAT---CGGAAGAGATCCTGGCACAACTCTTCGAATCGGGCTCGGGTGATGG 682179 Query 7272 ATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCG 7331 | || |||||||||| || || | | || || || || |||| || || |||| || Sbjct 682178 AGGTGTAGAAATCAATACCCTCAAAGAGAGAGTCGATCTCGATGGAGGTCTGGGCCGACG 682119 Query 7332 AAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGT 7391 | || | || ||||| || ||||| || || ||||| | || || || ||||| | || Sbjct 682118 AGGACAGGGTGCGCTTGGCACGCTCGCAGGCAGTTCGGAGTCGTCGCAGCGCACGGGCGT 682059 Query 7392 TACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTC 7451 | ||| | || ||||| || || || || ||||| | |||||| | || | Sbjct 682058 TGGAGGACAGGTCCTTCTTGTGCTTGCGCTTGAACTCGTTGACGAAGTGGTTGACCAGAC 681999 Query 7452 TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGA 7511 ||||| || |||||||||||||| ||||| || ||||||| ||||| || |||| Sbjct 681998 GGTTGTCGAAGTCCTCACCACCCAAGTGGGTATCACCAGCGGTCGACTTGACCTCGAAGA 681939 Query 7512 TACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA 7571 ||||| | || || | | | |||||||| || || |||||||| || ||||| |||| Sbjct 681938 TACCTTCCTCGATAGTCAGGAGAGAAACATCGAAAGTGCCACCACCGAGATCAAAGATGA 681879 Query 7572 GTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631 | || || ||| | || | ||||| || |||||||| || || || || || || | Sbjct 681878 GAACATTTCGCTCGCCCTCAATCTTCTTGTCAAGACCGTAAGCAATGGCGGCAGCAGTAG 681819 Query 7632 GTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 | ||||| || || || ||| ||| ||||| || || | || || || || |||| Sbjct 681818 GCTCATTGATGATTCGGAGAACGTTGAGGCCTGCGATGAGACCAGCGTCCTTGGTGGCTT 681759 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 |||| || |||||||| |||||||| ||||| || | || |||| |||| || Sbjct 681758 GTCGCTGAGAATCGTTGAAGTAGGCGGGGACAGTGATAACGGCGTTGTTGACCGGGACAC 681699 Query 7752 CGAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCTTCA 7810 | || || || || || | ||| ||| ||| ||| | ||| || ||||| ||| Sbjct 681698 CAAGGTAAGACTCAGCAGTCTCTCGCATCTTTACCAAG-ATCATGGAGCTGATCTCCTCA 681640 Query 7811 GCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCA 7870 | | || || || || || || || || | || | || || || | || Sbjct 681639 GGTGTGAAGGTCTTGGTCTCGCCCTTGAACTCGATCTCGACCACAGGCTTGCTC---GCC 681583 Query 7871 CCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 | ||| | ||| | | | | ||||||||| | || |||| ||| || ||| Sbjct 681582 TTGTCGATGATCTTGAATGGGAAGTGCTTCATATCGGCCTGCACCTCCGAGTCGGAGAAC 681523 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990 || | || || || ||||| ||||| || |||||||| | ||||||||| || |||| Sbjct 681522 TTGCGGCCAATGAGGCGCTTCGCATCGAAGACTGTGTTGTGGGGGTTCATCGCGACTTGG 681463 Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 ||||| || || || ||||| ||||| || | ||||| || || ||| |||| ||| Sbjct 681462 TTCTTGGCGGCATCTCCGATCAGACGCTC---GGTGTCCGTGAATGCCACGAACGACGGG 681406 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 || |||||||| || ||||||||||| || || || | | || | | ||| || Sbjct 681405 GTGGTTCGATTTCCCTGGTCGTTCGCGATGATCTCGATTCTATCCTCGCGATAGATACCA 681346 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 || ||||| || || ||||| | ||| |||||||| ||| Sbjct 681345 ACACACGAGTATGTGGTTCCAAGATCGATACCGATGGCT 681307 >seq10 Length=1675152 Score = 141 bits (156), Expect = 1e-28 Identities = 328/488 (67%), Gaps = 10/488 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||| | || ||||| || || ||||| ||| || |||| ||| Sbjct 561303 ATCGAAATCCTCACCACCGAGATGGGTATCACCGGCAGTCGCCAGGACCTCGAAGACACC 561362 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || ||| | || || ||||| || ||||||||||| || || | || | Sbjct 561363 CTGGTCGATGGAGAGCAGGGAGACATCGAAAGTACCACCACCGAGATCGTA---GACAAT 561419 Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 | || | || ||| | | | |||| || |||||||| ||||| || || ||||| || | Sbjct 561420 GATC-TGGCGTTCGCCATCGGTCTTGTCAAGACCGTATGCGATGGCAGCGGCCGTAGGCT 561478 Query 7635 CATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 | || | ||||| || |||| || || || ||||| | | || || || || || ||| Sbjct 561479 CGTTGACAATACGGAGGACA-TTGAGACCGGCAATGATACCGGCGTCCTTGGTGGCCTGT 561537 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 | || ||||| |||||||| ||||| || ||||| |||| ||||| ||||| || Sbjct 561538 CTCTGGTTGTCGTTGAAGTAGGCTGGGACAGTGACGACGGCGTGAGTGACCTTCTTGCCC 561597 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 || || | || |||| || ||||| || |||| ||| | || | || |||| Sbjct 561598 AGGTAGGCCTCAGCGACCTCCTTCATCTTTCCGAGAATCATGGCGGAGACTTCCTCAGGG 561657 Query 7814 GCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873 | ||||| || || ||||| | || |||| | ||||| || || | | Sbjct 561658 GTAAACTTCTTGTCCTCGCCGTTGACTTCGACTTGGACGATGGGCTT---GCCATCCTTG 561714 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 || ||||| || | ||| | |||||||| |||||| | | ||| || |||||| Sbjct 561715 TTGAGGACCTTGTATGGCCAGTGCTTCATATCAGCTTGGATGTCCTTGTCGGAGAACTTT 561774 Query 7934 CTTCCGAT 7941 | ||||| Sbjct 561775 CGGCCGAT 561782 >seq6 Length=2300778 Score = 131 bits (144), Expect = 2e-25 Identities = 361/545 (66%), Gaps = 15/545 (3%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| || || |||||||| || | | |||||| ||| ||| | | || Sbjct 980857 AGCTCCTCGAATCGGGCACGGGTGATCTGCATCTGGAAATCCTGGCCATCGAAGAGAGAG 980916 Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 ||||| || ||||| | || || || | || | |||||||| || || || || | Sbjct 980917 TCAATCTCGATGGTAGCCTGGGCACCGCTG--GACAGGGTTCGCTTGGCACGTTCGCAGG 980974 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT-TTACGT 7420 | || || | | || |||||||| | | ||| | ||||| ||||| ||| || || Sbjct 980975 CAGTCCGAAGTCTTCGGAGGGCACGGGCATCACCAGTGATATCCTTCTT-TGTCTTTCGG 981033 Query 7421 TTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 || || | | |||| |||| |||| | | ||||||||| | ||||||||||| Sbjct 981034 AGGAAGTCCTTCTTGCAGTGGTCGA-GGAGGTTAGTATCGAAATCCTGTCCACCCAAGTG 981092 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || ||||| || ||||| || | ||| || | ||||| | | ||| || Sbjct 981093 AGTGTCACCAGCGGTGGCCTTGACAGTGAAAACACCGCCCTGGATGTTGAGGAGCGACAC 981152 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT 7599 ||| || ||||| ||||| || || |||| || || || || | | | | ||| Sbjct 981153 ATCGAAGGTACCGCCACCGAGATCGTAAATCAGAACATTTCGCTCCTTGCC--AGACCTT 981210 Query 7600 -----ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 | |||||||| ||||| || || || || ||||| || || ||||| || | Sbjct 981211 CCGGAGCCCAGACCGTAGGCGATGGCTGCGGCAGTAGGTTCGTTGATGATACGGAGCACG 981270 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || || || ||||| | | || || || || || || ||||| ||||| |||||| Sbjct 981271 TTAAGTCCGGCAATGGCACCGGCGTCCTTGGTAGCCTGACGTTGGTTGTCGTTGAAGTAG 981330 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || || || || | ||| || | | || ||||| ||||| | | ||||| || || Sbjct 981331 GCAGGCACGGTGATGACGGCCTTCTCAACCTTCTTTCCGAGCTTCACCTCCGCAATCTCC 981390 Query 7775 TTCAT 7779 ||||| Sbjct 981391 TTCAT 981395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132204563000