Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq16 116 4e-21
seq3 93.3 5e-14
>seq16
Length=1288267
Score = 116 bits (128), Expect = 4e-21
Identities = 335/508 (66%), Gaps = 17/508 (3%)
Strand=Plus/Plus
Query 110574 GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGG 110633
|| |||||| | || | ||||| || || ||||| | ||||||||| || |||||
Sbjct 164968 GTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTCAACACGCTTCATGAAGAGATCAGG 165027
Query 110634 AATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCG 110693
|||||||| || ||| || ||||| ||| | ||||| | || ||||| ||
Sbjct 165028 AATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTGCCATGGTTCTTTCG 165087
Query 110694 TAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC 110753
|| |||| || || | | |||| ||||| || || || |||| |||| | ||
Sbjct 165088 GAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAGATTGCGAAAGCGCC 165147
Query 110754 ------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAG 110807
||| | ||| || | ||||| || || ||| ||||||||| | ||
Sbjct 165148 TGGGCGCTTGTTGCCACCT---TGATCCACATAACGAGCAGTGTTATTGAAGACTCGCAG 165204
Query 110808 CATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCAC 110866
||| ||||| | || | ||| ||||| || ||| || | || || | |||||
Sbjct 165205 CATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAACCGGT-GGCAC 165263
Query 110867 GAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCT 110925
| || |||||| | | ||||||||||| ||| ||| || |||||| |||
Sbjct 165264 GGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTGCACAGGTCT 165323
Query 110926 GTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAA 110985
|||| || | ||||| || ||||| || |||| || | | ||| ||||| |||
Sbjct 165324 -TGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGAAGCATGAA 165382
Query 110986 GACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGA 111045
|||| |||| |||| || |||||||||||||| || || | ||||| ||| | |
Sbjct 165383 GACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTGTGA--AAA 165440
Query 111046 CCTTG--GGACATCTTGTTGTATGTGTC 111071
|||| ||||||| |||||| || ||
Sbjct 165441 ACTTGCTGGACATCAAGTTGTAGGTTTC 165468
>seq3
Length=2734103
Score = 93.3 bits (102), Expect = 5e-14
Identities = 274/417 (66%), Gaps = 13/417 (3%)
Strand=Plus/Plus
Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG 11647
||| ||| |||||||||||||| || | |||||| | || || ||||| ||||||
Sbjct 2192911 TGTTGAAGCCGTCCATTTCTGTCAGGATCTGGTTTAGAGTAGCCTCCCGCTCGTCGTTGC 2192970
Query 11648 AGGGCATACCA---CCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATA 11704
| ||| | ||| | ||| | |||| |||||||||||||||||||| |
Sbjct 2192971 CGCCCATTCTGTTGCCTTCTTGTCGCGATCTGCCGATGGCGTCAATCTCATCGATGAAGA 2193030
Query 11705 CGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAA 11764
||| || || || ||||| | || || || || || || | || |
Sbjct 2193031 TGATGCATGGCGCATTCTTTCGTGCGGTAGCAAACAGATCTCGCACTCGGGATGGCCCGA 2193090
Query 11765 CACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGA 11822
| || ||||||||||| || || | | | || |||||||| ||| ||||| ||
Sbjct 2193091 CTCCGACGAACATCTCGACAAACTCGGAACCGC-TCACACTGAA-GAACGGAACTCCTGA 2193148
Query 11823 CTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAG 11882
|| || || | || || || || |||||||| || ||||| | || || ||||
Sbjct 2193149 TTCGCCTGCAGTAGCCTTGGCCAGCAGCGTCTTACCTGTTCCAGGGGGCCCGGCCAGAAT 2193208
Query 11883 GGCGCCACGGGGGATCTTGGCACC---ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAA 11939
||| || || ||||| || || || ||| | | ||||||| ||| |||| |||||
Sbjct 2193209 GGCACCGCGAGGGATTTTAGCTCCTAGCCTTTC---GAAGCGCTCGGGCGTCTTCAGGAA 2193265
Query 11940 GTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996
| ||||| |||| | ||| | |||||| || || || | ||||||| |||
Sbjct 2193266 GCTCACAAACTCCATGATTTCTTGCTTGGCTTCATCCATGCCAGCGACATCGGCGAA 2193322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975447835000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |