Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02- 10] 75 sequences; 42,602,674 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq16 188 9e-43 seq4 95.1 1e-14 >seq16 Length=1288267 Score = 188 bits (208), Expect = 9e-43 Identities = 1111/1757 (63%), Gaps = 69/1757 (4%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACA---TTGATTCT 75268 || ||| ||||| ||||||| || || |||| ||| ||| ||||| |||| Sbjct 165531 CCCCAGCACATGATCATGCGTGTTGCTGTCGGTATCT---GGGGAGACAATGTTGAGCGA 165475 Query 75269 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 75326 ||| | || || ||| || ||||||| |||| | | ||| || || | ||||||| Sbjct 165474 GTCATTGAAACCTACAACTTGATGTCCAGCAAGTTTT--TCACACATGCCTCGCCAACCC 165417 Query 75327 TCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGG 75386 |||||||||| || || || | || |||| |||||||| ||| || |||| Sbjct 165416 TCTTCAATGCGGGCACCCCTCAGGCTCAACTGTCTTCATGCTTCCTAGTCGACATGAAGG 165357 Query 75387 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 75446 | ||| || | || || || | || || | | ||||| ||||| ||| || Sbjct 165356 ATGACAGCATTGAGGGCATTTACGACACCCTCAAGACCTGTGCAATGATCTCCAAGATGG 165297 Query 75447 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGA 75506 |||| |||||||| | ||||||| | | | |||| || || ||| | Sbjct 165296 CTGGTGGTATTGGCCTCAACATCCACCGTATCCGTGCCACCGGTTCATACATCGCGGGCA 165237 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | ||||| || | ||| | ||||| ||||| || || || || ||| || || | Sbjct 165236 CCAATGGCACTTCCAACGGTGTCATTCCCATGCTGCGAGTCTTCAATAACACTGCTCGTT 165177 Query 75567 ATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 |||| |||||| | ||| | || || | |||| ||||| | || || ||| Sbjct 165176 ATGTGGATCAAG-GTGGCAACAAGCGCCCAGGCGCTTTCGCAATCTACCTTGAGCCTTGG 165118 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 ||||| || | | |||||| | || | ||| ||||| || | ||||| | ||| Sbjct 165117 CATGCGGACGTGTTCGAGTTCATGGACCTCCGAAAGAACCATGGCAAGGAAGAAGTTCGC 165058 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | |||||||| ||||||||||||| || || ||||||||||| ||||| || Sbjct 165057 GCACGTGATCTCTTCCTCGCCCTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGAAAAG 164998 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 || | ||| |||| | ||||| || | || || || | ||| ||| Sbjct 164997 AACGGCGATTGGACTCTGATGTGTCCCAACGAATGTCCCGGCCTGGCTGACTGCTACGGT 164938 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG------AGGGTAGAGCCAATGCG 75856 || ||||| || || |||||| ||||||||| || ||||| | ||| | Sbjct 164937 GACGAGTTCGAGGCTCTCTACGAAAAGTATGAGAAGCTCAACAAGGGTCG---CAA---G 164884 Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 || | | || | | || | ||||| | || || || | | ||||| || || |||| Sbjct 164883 ACCAT-CAAGGCACAGAAGCTTTGGTATGCCATCCTAGAGGCCCAGACTGAAACCGGAAA 164825 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 || | ||||| ||||| |||||||| || ||||| ||||| |||||| | || || Sbjct 164824 CCCTTTCATGCTCTACAAAGATGCTTGCAATCGCAAGAGCAACCAGAAGAATCTTGGCAC 164765 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||| ||||| ||||| |||||||| || | |||||| | |||||| || Sbjct 164764 CATCCGCAGCTCCAATCTCTGCACGGAGATCATCGAGTACTGCGCCCCCGATGAGGTCGC 164705 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT------CAATGAAGAGACTCG 76089 || ||||| ||||| || | ||| | || | ||| |||||||| || | Sbjct 164704 CGTCTGCAACTTGGCTTCGCTGGCCTTGCCGTCCTTTGTGGACTACAATGAAGG--CT-G 164648 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTAC-CAAAAATCTAAACC 76148 | | ||| | |||| || || || | || | ||||| | ||| | || Sbjct 164647 C---TATGACTTCCAAAAGCTGCACGATGTTACCGAAGTTGTTGTTCGAAACTTGAATAA 164591 Query 76149 GAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACA 76208 || |||| ||| || | || |||||| | || | || || ||||| |||| Sbjct 164590 GA-TCATCGACGTCAACTACTACCCCGTTCCGGAAGCACAGAACAGCAACATGCGCCACA 164532 Query 76209 GACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT 76268 | || |||||| | || ||||| ||||| || |||| || | ||| | | Sbjct 164531 GGCCCATTGGTGTCGGCGTTCAGGGTCTTGCAGATGCGTTCCTAGCCCTTCGCCTGCCTT 164472 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 | || || ||| || ||| |||| | || ||||| || || || || || Sbjct 164471 TCGAGTCTCCTGAGGCACGAGAGCTGAACAAGCAGATATTTGAGACAATTTACCATGCCG 164412 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 | || || || | || | | ||||| | || |||| || || | Sbjct 164411 CTCTCACTGCTTCCATGGAGCTTGCCAAGGAGCAAGGCCCATACTCCACATACGAAGGCT 164352 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACT 76448 |||| | || ||||| | || |||||||| |||||| || ||||| || | | || Sbjct 164351 CTCCTGTATCTCAAGGCATTCTGCAGTTTGACATGTGG-AATGTGAAGCCTTCCG-ATCT 164294 Query 76449 ACG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506 | |||||| || ||||| | ||||||| | | || |||| |||||||| | Sbjct 164293 TTGGGACTGGGCATCGCTGAAGGAGCAAATCAAGGCGCATGGCATTCGCAACAGTCTGCT 164234 Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566 | ||||||||||| || ||| || | || ||||||||||| || || |||||||| Sbjct 164233 AGTAGCACCAATGCCTACCGCCAGTACTTCCCAGATCTTGGGTAACAACGAGTGCTTTGA 164174 Query 76567 ACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAA 76626 || |||||| | || ||||||| | ||| ||| || || ||||| | ||||| Sbjct 164173 GCCGTACACATCCAATATCTACCAACGCAGAGTCCTTGCTGGCGAGTTCCAGGTCGTCAA 164114 Query 76627 CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGA--- 76683 | ||| | || || || | || || | ||||| | | |||||| | Sbjct 164113 CCCTTGGCTCCTAAAGGATCTGGTTGACATGGGCTTGTGGTCTGACGCCATGAAGAACCG 164054 Query 76684 TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCA 76742 | ||| || ||||| | || ||| | || || || || | ||||| | ||||||| Sbjct 164053 TATCATTGCTGAAAAC----GGCTCCGTCCAGAACATTCCAAACATCCCCGCAGATATCA 163998 Query 76743 AGAATCTCTACCGCACAGTGTGGGAAATC---AAGATGAAAGATGTCATTGACATGGCCG 76799 | |||||| || || ||||||||| || | | |||| | ||||| | Sbjct 163997 AAGCCCTCTACAAGACTGTCTGGGAAATCTCACAGCGTACTGTTGTC---CAGATGGCTG 163941 Query 76800 CAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGA--ATCTATTCATGGAAAGT 76855 | || || ||| ||||||||||| |||| ||| ||| ||| || ||| || Sbjct 163940 CCGACCGCGGTGCCTTCATTGATC--AGTCTCAGTCCTTGAACATCCAT--ATGAAAGAC 163885 Query 76856 CCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACC 76915 || || ||| |||| || | |||||| | || ||||| | || || || ||| Sbjct 163884 CCGACTATGGGCAAGATCACCAGCATGCATTTCGCCGGCTGGAAGCTCGGTCTTAAGACC 163825 Query 76916 GGAATGTACTATCTCCG 76932 ||||||||||| ||||| Sbjct 163824 GGAATGTACTACCTCCG 163808 >seq4 Length=2394644 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/198 (72%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCTCGCTCCTTCGCCGAG 65079 |||||||| | ||||| || |||| || |||| |||||| ||||||| | Sbjct 143448 AAGAAGGCTGACTGGGCCATTCGATGGATTACCGACAAGAAGTCTA---CCTTCGCTCAA 143504 Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTAT 65138 || ||| |||| || || || || |||||||||||| ||| | || ||| | || Sbjct 143505 CGTCTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGCGGTGCCTT-TGCTTCCAT 143563 Query 65139 TTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTC 65198 | |||||||||||||| || ||||||||||| || ||||| || || || || || Sbjct 143564 CTTCTGGTTGAAGAAGCGTGGCCTCATGCCAGGTCTCACATTCTCCAACGAGCTCATCTC 143623 Query 65199 CCGAGATGAGGGTCTCCA 65216 ||||| ||||||||||| Sbjct 143624 GCGAGACGAGGGTCTCCA 143641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569040716000