Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02- 10] 75 sequences; 42,602,674 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq16 196 4e-45 seq25 138 1e-27 seq10 100 3e-16 >seq16 Length=1288267 Score = 196 bits (216), Expect = 4e-45 Identities = 923/1448 (64%), Gaps = 56/1448 (4%) Strand=Plus/Plus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | |||||| || || || || | |||| || ||| || ||| ||| | || Sbjct 164113 GTTGACGACCTGGAACTCGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGG 164172 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 |||||| | |||||||| |||| ||||| | || | ||||| ||||| || || Sbjct 164173 CTCAAAGCACTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTAC 164232 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 | ||| || || | || || ||||||| | ||||| ||||| | ||||||||| Sbjct 164233 TAGCAGACTGTTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCA 164292 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 | |||| ||| || |||||||| || |||| | || || | | | ||| Sbjct 164293 AAGATCGGAAGGCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAGA 164352 Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGC 138800 ||||||||| | |||| || ||| | || | ||| || || ||| || Sbjct 164353 GCCTTCGTATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGC 164412 Query 138801 ACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTA 138860 ||| |||||| || || ||||||| || ||| ||| ||||| | |||| | Sbjct 164413 GGCATGGTAAATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGACTCGAA 164472 Query 138861 CGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCG 138920 |||| ||| || |||||| || || || || || ||||| || || | || | Sbjct 164473 AGGCAGGCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCT 164532 Query 138921 ATGGCGCAGATTTGACGCTTTTGCG-GCTTCGATA---GGATAATAGTTTACATCGATGA 138976 ||||||| || ||| || | ||||| | || || ||||| || ||||||| Sbjct 164533 GTGGCGCATGTT----GCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGA 164588 Query 138977 TTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATG 139036 | || || || ||||| || || || | || || | | || || || || Sbjct 164589 TCTTATTCAAGTTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGC 164648 Query 139037 TGCCCCCGTTGTCGTCGACGACGT-CGACAAATTTGTTGACACAAATCGAGGCTATGTTG 139095 ||| | |||| ||| || | | || ||| | || ||| || | |||| Sbjct 164649 AGCCTTCATTGTAGTCCACAAAGGACGGCAAG------GCCAG----CGAAGCCAAGTTG 164698 Query 139096 CACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACAC 139155 || || || || || |||||| ||| ||| |||| || || | || | ||| | Sbjct 164699 CAGACGGCGACCTCATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTG 164758 Query 139156 TTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATA 139215 ||| || || | ||| | || ||||| || || || |||||||||||||| ||||| Sbjct 164759 CGGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATG 164818 Query 139216 TACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAA-------GTCCCT 139268 | || | || ||||| || | ||||| ||| | | ||| || ||| Sbjct 164819 AAAGGGTTTCCGGTTTCAGTCTGGGCCTCTAGGATGGCAT--ACCAAAGCTTCTGTGCCT 164876 Query 139269 AGCTTGTATTT-GACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGA 139327 | | || || ||| | || || | ||| |||||||||||||| | |||| Sbjct 164877 TGATGGTCTTGCGACCCTTGTTGAGCTT------CTCATACTTTTCGTAGAGAGCCTCGA 164930 Query 139328 A-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCAT 139386 | ||| ||||||||| ||||| || || |||| | || |||||||| || | ||| Sbjct 164931 ACTCG-TCACCGTAGCAGTCAGCCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCAA 164989 Query 139387 ACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAA 139446 |||||||| | || ||| ||||||| ||||| |||||||||| |||| | | | Sbjct 164990 TCGCCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGA 165049 Query 139447 T--CGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC--ATGTTAAGGAAATCAAA 139502 | || |||| || |||||| ||||| | | |||| | || | ||| || || Sbjct 165050 TCACGTGCGCGAACT--TCTTCC-TTGCCATGGTTC-TTTCGGAGGTCCATGAACTCGAA 165105 Query 139503 AACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACC 139559 ||||| || ||||| || || || ||||| || | |||||| || |||||||| Sbjct 165106 CACGTCCGCATGCCAAGGCTCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACC 165165 Query 139560 TTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGC 139619 |||||| || | || ||| |||||||| || |||| ||| || | |||| | | Sbjct 165166 TTGATCCACATAACGAGCAGTGTTATTGAAGACTCGCAGCATGGGAATGACACCGTTGGA 165225 Query 139620 TGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTACATTGAT 139676 || || ||||||| |||| | || | || || |||| || | |||| Sbjct 165226 AGTGCCATTGGTGCCCGCGATGTATGAACCGGTG---GCACGGATACGGTGGATGTTGAG 165282 Query 139677 GCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTCGTATATAC 139735 ||| || || || | | ||||| || | | || || | | || ||||| || | Sbjct 165283 GCCAATACCACCAGCCATCTTGGAGATCATTGCACAGGTCTTG-AGGGTGTCGTAAATGC 165341 Query 139736 CTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCG 139795 | |||||||| |||| ||| ||| || |||||||| || ||||| | | | Sbjct 165342 CCTCAATGCTGTCATCCTTCATGTCGACTAGGAAGCATGAAGACAGTTGAGCCTGAGGGG 165401 Query 139796 TGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGT 139855 |||| || || || || || || || ||||| | | | |||||||| | || Sbjct 165402 TGCCCGCATTGAAGAGGGTTGGCGAGGCATGTGTGAAAAACTTGCTGGACATCAAGTTGT 165461 Query 139856 ACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCA 139915 | ||||| ||| | | | ||| || ||| ||||||||||| || ||||| | || Sbjct 165462 AGGTTTCAATGACTCGCTCAACATTGTCTCCCCAGATACCGACAGCAACACGCATGATCA 165521 Query 139916 TATGTTGG 139923 | || ||| Sbjct 165522 TGTGCTGG 165529 >seq25 Length=449666 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || || ||||| || ||||| || || | || Sbjct 296375 ATGCAGATCTTCGTCAAAACCCTTACGGGGAAGACTATCACCCTCGAGGTGGAGTCTTCC 296434 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || || || || ||| Sbjct 296435 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGCATCCCGCCAGACCAA 296494 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| ||||| || ||||| ||||| ||| | | || ||||| ||| Sbjct 296495 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTATCTGATTACAAC 296554 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||||| ||||| ||||| | ||| ||||| |||| | || ||||||| Sbjct 296555 ATTCAGAAGGAGTCGACTTTGCACCTGGTGCTGCGTCTACGAGGAGGCG 296603 >seq10 Length=1675152 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || |||||| | |||||||| | | Sbjct 200245 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACCATTACGTTGGAAGTAGAGTCGTCT 200304 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | ||||| ||||| || || || || || || || || || || Sbjct 200305 GACACAATCGACAACGTAAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAG 200364 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| || || || |||||||| || | | | || || || ||| Sbjct 200365 CAACGTCTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCCTGAGCGACTACAAC 200424 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||||| || | || ||||||| ||| Sbjct 200425 ATCCAGAAGGAGTCTACGCTCCACTTAGTCCTCCGTCTGCGCGGCGGC 200472 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || ||||| || || | || Sbjct 200017 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTTGAGTCATCC 200076 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | ||||| ||||| |||||||| || || || || || || || Sbjct 200077 GATACCATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 200136 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| || || || ||| ||||||| ||| | || || || ||| Sbjct 200137 CAGCGACTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGAACGCTCTCGGACTACAAC 200196 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| ||||| || || || || Sbjct 200197 ATTCAGAAGGAGTCTACCCTCCA 200219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897178221000