Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq16 217 1e-51
seq25 122 8e-23
seq10 114 1e-20
>seq16
Length=1288267
Score = 217 bits (240), Expect = 1e-51
Identities = 997/1553 (64%), Gaps = 69/1553 (4%)
Strand=Plus/Plus
Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319
|| || ||||| |||||||| || || || | || | || | ||| || ||||
Sbjct 164114 TTGACGACCTGGAACTCGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGC 164173
Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379
||||| |||||||||| ||||| ||||| | || | || || ||||| |||||
Sbjct 164174 TCAAAGCACTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACT 164233
Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAG 148439
||||| |||||| | || | || |||| |||||| | |||||||||||
Sbjct 164234 AGCAGACTGTTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAA 164293
Query 148440 AGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCG-GCTAGCGGGGCT 148498
|| || || |||| ||||||||||| ||||||||||||| | | || | ||
Sbjct 164294 AGATCGGAAGGCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATA-CAGGAGA 164352
Query 148499 GCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGC 148558
||| ||||| | | ||| || || ||| || || || || | || ||| ||
Sbjct 164353 GCCTTCGTATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGC 164412
Query 148559 GCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGC---AGCGCCGC-CGACTCGCTTT 148614
| | | |||||| ||||| || ||| |||| ||| | ||| | || | |
Sbjct 164413 GGCATGGTAAATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGAC----T 164468
Query 148615 CGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGG 148674
|| | |||| || || | ||||| || ||||| ||||| ||||| || |||||||
Sbjct 164469 CGAAAGGCAGGCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGG 164528
Query 148675 GCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATG 148733
||| ||| |||||| | | || || || | || |||| |||| |||||||
Sbjct 164529 GCCTGTGGCGCATGTTGCTGTTCTGTGC-TTCCGGAACGGGGTAGTAGTTGACGTCGATG 164587
Query 148734 ATCTT-GTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTA 148792
||||| ||||| || || || || || | |||| | ||||| || || || ||
Sbjct 164588 ATCTTATTCAAG-TTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATA 164646
Query 148793 ---------CTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACAC 148843
|||| || || | | | ||| || ||| | || || | ||||| ||
Sbjct 164647 GCAGCCTTCATTGTAGTCCACAAAGGA-CGG--CAAGGCCAGCGAAGCCAAGTTGCAGAC 164703
Query 148844 GGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGAT 148903
||| |||||| ||||||| |||||| | |||||| | ||| |||||| || |||
Sbjct 164704 GGCGACCTCATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGAT 164763
Query 148904 CACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963
||| | ||||| || |||||||||| ||||| || || ||||| |||||| | ||
Sbjct 164764 GGTGCCAAGATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGG 164823
Query 148964 TCCGCCAGTTTCCACCTGCGTTTCCACTATG---AACCGATGCAGGTCCTGCGCGCGCAC 149020
|| ||||| ||| | || | ||| ||| | || | ||| || |
Sbjct 164824 GTTTCCGGTTTCAGTCTGGGCCTCTAGGATGGCATACCAA---AGCTTCTGTGC-----C 164875
Query 149021 TTGCTGCTCGTAGCGACCCT------CCTGCTCGTA--TAAAGTATACAGCCGCTCGAAC 149072
||| || || | |||||||| || ||| || | ||| | ||| |||||||
Sbjct 164876 TTGATGGTC-TTGCGACCCTTGTTGAGCTTCTCATACTTTTCGTAGAGAGC--CTCGAAC 164932
Query 149073 GCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACG 149132
| || |||||||| || | || ||||| || | || || ||||| || | ||| ||
Sbjct 164933 TCGTCACCGTAGCAGTCAGCCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCG 164992
Query 149133 CCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCG 149192
|||| | | || |||||||| || ||||| || | ||| || ||| | ||| ||
Sbjct 164993 CCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCA 165052
Query 149193 CGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGA-GCACGCTGAATATGTC 149251
|| || ||||| ||| ||| || |||| | | || | ||| | |||
Sbjct 165053 CGTGCGCGAACTTCTTCCTTGCCATGGTTCTTTCGGAGGTCCATGAACTC-GAACACGTC 165111
Query 149252 CGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTC 149308
||| ||||| ||||||| ||| | |||| ||||| |||| ||||| || || ||
Sbjct 165112 CGCATGCCAAGGCTCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATC 165171
Query 149309 GACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCAC---TGGCAGT 149365
|| | || | |||| || || ||||| | ||| || |||| ||| ||| |||
Sbjct 165172 CACATAACGAGCAGTGTTATTGAAGACTCGCAGCATGGG---AATGACACCGTTGGAAGT 165228
Query 149366 GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGAT 149425
||| || || ||| ||| || || | ||| | ||||| ||| ||
Sbjct 165229 GCCATTGGTGCCCGCGATGTATGAACCGGTGGCACGGATACGGTGGATGTTGAGGCCAAT 165288
Query 149426 GCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGA 149484
|| || ||| | ||| ||||| || ||| ||| || ||| |||||||| |
Sbjct 165289 ACCACCAGCCAT-CTTGGAGATCATTGCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAA 165347
Query 149485 TGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGG 149544
||||||| ||||||| | || ||||| || ||| ||| | | | ||||| |
Sbjct 165348 TGCTGTCATCCTTCATGTCGACTAGGAAGCATGAAGACAGTTGAGCCTGAGGGGTGCCCG 165407
Query 149545 CCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATCTCGTACGAC 149603
| ||| | ||| || ||| ||||| |||| || |||| ||||| | ||| |
Sbjct 165408 CATTGAAGAGGGTTGGCGAGGCATGTGTGAAAAACTTGCTGG-ACATCAAGTTGTAGGTT 165466
Query 149604 TCGAGCACGCGGTCCA---TGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATA 149660
|| | || || || | |||| || ||| ||| || | || || ||||| | |||
Sbjct 165467 TCAATGACTCGCTCAACATTGTC-TCCCCA--GATACCGACAGCAACACGCATGATCATG 165523
Query 149661 TGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTC 149720
||||| |||||||| | | ||| ||| ||| || | |||| | |||| ||
Sbjct 165524 TGCTGGGGTCGCTCAACGATCTTGCCATCAAGTTTAAGGAGGTAGGATCTCTCTAAAGTT 165583
Query 149721 TTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773
||| | || || || | ||||| ||||| ||| | | ||||||||| |||
Sbjct 165584 TTGAAACCGAAATATTGGTAGTTGAAGTCTCGGTCATACACAATGGCGGAGTC 165636
>seq25
Length=449666
Score = 122 bits (134), Expect = 8e-23
Identities = 148/200 (74%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|| ||||| ||||| || |||||||| | || || || ||||||||||||||||
Sbjct 296571 GTCGACTCCTTCTGAATGTTGTAATCAGATAGGGTTCGGCCG--TCCTCGAGCTGCTTGC 296514
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | ||||| ||||| || |||||||| |||||||| |||||| ||
Sbjct 296513 CGGCGAAGATCAATCGCTGTTGGTCTGGCGGGATGCCCTCCTTGTCTTGGATCTTGGACT 296454
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||||| | |||||| |||| ||||| || || || || || |
Sbjct 296453 TGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCCGTAAGGG 296394
Query 133642 TTTTTACGAAAATCTGCATG 133661
|||| ||||| |||||||||
Sbjct 296393 TTTTGACGAAGATCTGCATG 296374
>seq10
Length=1675152
Score = 114 bits (126), Expect = 1e-20
Identities = 150/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| ||||| || ||||| || | ||| ||| |||||| | ||
Sbjct 200220 ATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTTCGACC-GTCCTCCAACT 200162
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||||||| | ||||| ||||||||||| || |||||||| |||||||| ||||
Sbjct 200161 GCTTGCCCGCGAAGATGAGTCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCT 200102
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | || | || |||| | ||| || |||| |||| || |||||||
Sbjct 200101 TGGACTTTACGTTATCGATGGTATCGGATGACTCAACCTCGAGAGTGATCGTCTTGCCGG 200042
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| || || || ||||| ||||||||
Sbjct 200041 TGAGGGTCTTGACGAAGATCTGCAT 200017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420346793000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |