Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02- 10] 75 sequences; 42,602,674 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq16 217 1e-51 seq25 122 8e-23 seq10 114 1e-20 >seq16 Length=1288267 Score = 217 bits (240), Expect = 1e-51 Identities = 997/1553 (64%), Gaps = 69/1553 (4%) Strand=Plus/Plus Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319 || || ||||| |||||||| || || || | || | || | ||| || |||| Sbjct 164114 TTGACGACCTGGAACTCGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGC 164173 Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379 ||||| |||||||||| ||||| ||||| | || | || || ||||| ||||| Sbjct 164174 TCAAAGCACTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACT 164233 Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAG 148439 ||||| |||||| | || | || |||| |||||| | ||||||||||| Sbjct 164234 AGCAGACTGTTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAA 164293 Query 148440 AGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCG-GCTAGCGGGGCT 148498 || || || |||| ||||||||||| ||||||||||||| | | || | || Sbjct 164294 AGATCGGAAGGCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATA-CAGGAGA 164352 Query 148499 GCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGC 148558 ||| ||||| | | ||| || || ||| || || || || | || ||| || Sbjct 164353 GCCTTCGTATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGC 164412 Query 148559 GCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGC---AGCGCCGC-CGACTCGCTTT 148614 | | | |||||| ||||| || ||| |||| ||| | ||| | || | | Sbjct 164413 GGCATGGTAAATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGAC----T 164468 Query 148615 CGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGG 148674 || | |||| || || | ||||| || ||||| ||||| ||||| || ||||||| Sbjct 164469 CGAAAGGCAGGCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGG 164528 Query 148675 GCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC-GGATAGTGGTTGCGGTCGATG 148733 ||| ||| |||||| | | || || || | || |||| |||| ||||||| Sbjct 164529 GCCTGTGGCGCATGTTGCTGTTCTGTGC-TTCCGGAACGGGGTAGTAGTTGACGTCGATG 164587 Query 148734 ATCTT-GTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTA 148792 ||||| ||||| || || || || || | |||| | ||||| || || || || Sbjct 164588 ATCTTATTCAAG-TTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATA 164646 Query 148793 ---------CTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACAC 148843 |||| || || | | | ||| || ||| | || || | ||||| || Sbjct 164647 GCAGCCTTCATTGTAGTCCACAAAGGA-CGG--CAAGGCCAGCGAAGCCAAGTTGCAGAC 164703 Query 148844 GGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGAT 148903 ||| |||||| ||||||| |||||| | |||||| | ||| |||||| || ||| Sbjct 164704 GGCGACCTCATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGAT 164763 Query 148904 CACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963 ||| | ||||| || |||||||||| ||||| || || ||||| |||||| | || Sbjct 164764 GGTGCCAAGATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGG 164823 Query 148964 TCCGCCAGTTTCCACCTGCGTTTCCACTATG---AACCGATGCAGGTCCTGCGCGCGCAC 149020 || ||||| ||| | || | ||| ||| | || | ||| || | Sbjct 164824 GTTTCCGGTTTCAGTCTGGGCCTCTAGGATGGCATACCAA---AGCTTCTGTGC-----C 164875 Query 149021 TTGCTGCTCGTAGCGACCCT------CCTGCTCGTA--TAAAGTATACAGCCGCTCGAAC 149072 ||| || || | |||||||| || ||| || | ||| | ||| ||||||| Sbjct 164876 TTGATGGTC-TTGCGACCCTTGTTGAGCTTCTCATACTTTTCGTAGAGAGC--CTCGAAC 164932 Query 149073 GCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACG 149132 | || |||||||| || | || ||||| || | || || ||||| || | ||| || Sbjct 164933 TCGTCACCGTAGCAGTCAGCCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCG 164992 Query 149133 CCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCG 149192 |||| | | || |||||||| || ||||| || | ||| || ||| | ||| || Sbjct 164993 CCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCA 165052 Query 149193 CGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGA-GCACGCTGAATATGTC 149251 || || ||||| ||| ||| || |||| | | || | ||| | ||| Sbjct 165053 CGTGCGCGAACTTCTTCCTTGCCATGGTTCTTTCGGAGGTCCATGAACTC-GAACACGTC 165111 Query 149252 CGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTC 149308 ||| ||||| ||||||| ||| | |||| ||||| |||| ||||| || || || Sbjct 165112 CGCATGCCAAGGCTCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATC 165171 Query 149309 GACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCAC---TGGCAGT 149365 || | || | |||| || || ||||| | ||| || |||| ||| ||| ||| Sbjct 165172 CACATAACGAGCAGTGTTATTGAAGACTCGCAGCATGGG---AATGACACCGTTGGAAGT 165228 Query 149366 GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGAT 149425 ||| || || ||| ||| || || | ||| | ||||| ||| || Sbjct 165229 GCCATTGGTGCCCGCGATGTATGAACCGGTGGCACGGATACGGTGGATGTTGAGGCCAAT 165288 Query 149426 GCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGA 149484 || || ||| | ||| ||||| || ||| ||| || ||| |||||||| | Sbjct 165289 ACCACCAGCCAT-CTTGGAGATCATTGCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAA 165347 Query 149485 TGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGG 149544 ||||||| ||||||| | || ||||| || ||| ||| | | | ||||| | Sbjct 165348 TGCTGTCATCCTTCATGTCGACTAGGAAGCATGAAGACAGTTGAGCCTGAGGGGTGCCCG 165407 Query 149545 CCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATCTCGTACGAC 149603 | ||| | ||| || ||| ||||| |||| || |||| ||||| | ||| | Sbjct 165408 CATTGAAGAGGGTTGGCGAGGCATGTGTGAAAAACTTGCTGG-ACATCAAGTTGTAGGTT 165466 Query 149604 TCGAGCACGCGGTCCA---TGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATA 149660 || | || || || | |||| || ||| ||| || | || || ||||| | ||| Sbjct 165467 TCAATGACTCGCTCAACATTGTC-TCCCCA--GATACCGACAGCAACACGCATGATCATG 165523 Query 149661 TGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTC 149720 ||||| |||||||| | | ||| ||| ||| || | |||| | |||| || Sbjct 165524 TGCTGGGGTCGCTCAACGATCTTGCCATCAAGTTTAAGGAGGTAGGATCTCTCTAAAGTT 165583 Query 149721 TTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773 ||| | || || || | ||||| ||||| ||| | | ||||||||| ||| Sbjct 165584 TTGAAACCGAAATATTGGTAGTTGAAGTCTCGGTCATACACAATGGCGGAGTC 165636 >seq25 Length=449666 Score = 122 bits (134), Expect = 8e-23 Identities = 148/200 (74%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || |||||||| | || || || |||||||||||||||| Sbjct 296571 GTCGACTCCTTCTGAATGTTGTAATCAGATAGGGTTCGGCCG--TCCTCGAGCTGCTTGC 296514 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | ||||| ||||| || |||||||| |||||||| |||||| || Sbjct 296513 CGGCGAAGATCAATCGCTGTTGGTCTGGCGGGATGCCCTCCTTGTCTTGGATCTTGGACT 296454 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | |||||| |||| ||||| || || || || || | Sbjct 296453 TGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTCCCCGTAAGGG 296394 Query 133642 TTTTTACGAAAATCTGCATG 133661 |||| ||||| ||||||||| Sbjct 296393 TTTTGACGAAGATCTGCATG 296374 >seq10 Length=1675152 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || ||||| || | ||| ||| |||||| | || Sbjct 200220 ATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTTCGACC-GTCCTCCAACT 200162 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||||||| | ||||| ||||||||||| || |||||||| |||||||| |||| Sbjct 200161 GCTTGCCCGCGAAGATGAGTCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCT 200102 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | || | || |||| | ||| || |||| |||| || ||||||| Sbjct 200101 TGGACTTTACGTTATCGATGGTATCGGATGACTCAACCTCGAGAGTGATCGTCTTGCCGG 200042 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || ||||| |||||||| Sbjct 200041 TGAGGGTCTTGACGAAGATCTGCAT 200017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420346793000