Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4 104 3e-16
seq16 91.5 2e-12
>seq4
Length=2394644
Score = 104 bits (114), Expect = 3e-16
Identities = 207/303 (68%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || |||||||| || ||||| |||||||| |||||| | || |
Sbjct 143043 GATTTGGCAAATGTAC-AAGAAGGCCGAAGCGTCCTTCTGGACCGCTGAGGAGATTGATC 143101
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTC 1455887
| | || |||| | ||| | | | |||||||||| | |||
Sbjct 143102 TGTCCAAGGATCTTCACGAT----TGGAACAACAAGATCAACGACGACGAGAAATACTTC 143157
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| ||| | | ||||| || |||||| ||||||||||| |||||| || |
Sbjct 143158 ATCTCACACATTTTGGCCTTCTT-CGCCGCGTCTGATGGCATCGTCAACGAGAATCTCGT 143216
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| | || | | |||||||| | || ||||| || | || ||||| ||||||||
Sbjct 143217 CGAGAGATTCAGCAGCGAGGTCCAGATCCCTGAGGCTCGCTGCTTCTACGGCTTCCAGAT 143276
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| || ||||||||||| || || ||||| || || |||||||| || |||||||
Sbjct 143277 TATGATGGAGAACATCCACTCGGAGACATACTCTCTGCTCATCGACACATATATCAAGGA 143336
Query 1456068 CCC 1456070
||
Sbjct 143337 GCC 143339
>seq16
Length=1288267
Score = 91.5 bits (100), Expect = 2e-12
Identities = 258/392 (66%), Gaps = 17/392 (4%)
Strand=Plus/Minus
Query 259791 TCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCG 259850
|||| ||||| |||||| | ||| |||||||||| || | || | |||| |
Sbjct 165542 TCGTTGAGCGACCCCAGCACATGATCATGCGTGTTGCTGTCGGTA--TCTGGG------G 165491
Query 259851 ACGTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTG 259909
| ||||||| | |||| || | | |||||| | ||||| ||||| |||
Sbjct 165490 A----GACAATG---TTGAGCGAGTCATTGAAACCTACAACTTGATGTC-CAGCAAGTTT 165439
Query 259910 TTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCG 259969
||||| || |||| || ||||| ||||| ||||| || | | || || ||
Sbjct 165438 TTCACACATGCCTCGCCAACCCTCTTCAATGCGGGCACCCCTCAGGCTCAACTGTCTTCA 165379
Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029
||||| || | |||||||||| || || |||||||| || ||||| ||||||
Sbjct 165378 TGCTTCCTAGTCGACATGAAGGATGACAGCATTGAGGGCATTTACGACACCCTCAAGACC 165319
Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089
|| || | ||||||||| ||| || || || || | | ||| | || |||
Sbjct 165318 TGTGCAATGATCTCCAAGATGGCTGGTGGTATTGGCCTCAACATCCACCGTATCCGTGCC 165259
Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGC 260149
| || | ||| | ||||||||||| ||| |||||||| | | |||||||| ||
Sbjct 165258 ACCGGTTCATACATCGCGGGCACCAATGGCACTTCCAACGGTGTCATTCCCATGCTGCGA 165199
Query 260150 GTTTTTAACGACACGGCGCGCTACGTCGACCA 260181
|| || || |||| || || || || || ||
Sbjct 165198 GTCTTCAATAACACTGCTCGTTATGTGGATCA 165167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177803966112150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |