Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02- 10] 75 sequences; 42,602,674 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq16 174 2e-38 >seq16 Length=1288267 Score = 174 bits (192), Expect = 2e-38 Identities = 1175/1876 (63%), Gaps = 55/1876 (3%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || ||||| ||||| | | || | || ||||| || |||||||| ||||| || ||| Sbjct 163775 GTGAACTGGATGGGCGCAGCCGCTGCTTGAGTACGGAGGTAGTACATTCCGGTCTTAAGA 163834 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || || |||| ||| ||||||||| || || | ||| | | || || ||| Sbjct 163835 CCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATAGTCGGGTCTTTCATA 163894 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 || || |||| || ||| ||||| ||||| || || | || || ||||| | | | Sbjct 163895 TGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCGCGGTCGGCAGCCATCTGGACA 163954 Query 68554 A---TACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGA 68610 | ||| || | ||| |||||||| | |||||| | | ||||||||| | || Sbjct 163955 ACAGTACGCTGT-GAG--ATTTCCCAGACAGTCTTGTAGAGGGCTTTGATATCTGCGGGG 164011 Query 68611 AGGCTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCA 68667 | | | | | || || | ||| || || | || || ||||| || | ||| Sbjct 164012 ATGTTTGGAATGTTCTGGACGGAGCCGTTTTCAGCAATGATACGGTTCTTCATGGCGTCA 164071 Query 68668 TTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCC 68727 |||||| | || | | | | ||||| || || || | || || || Sbjct 164072 GACCACAAGCCCATGTCAACCAGATCCTTTAGGAGCCAAGGGTTGACGACCTGGAACTCG 164131 Query 68728 CCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTT 68787 |||| | ||||| || ||| ||||| || || || || | | || || || Sbjct 164132 CCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTCAAAGCACTCGTTGTTA 164191 Query 68788 CCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGA 68847 |||| || || | ||| || || ||||| ||||| || | | ||| || | || Sbjct 164192 CCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGTTGCGAATG 164251 Query 68848 CCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACA 68907 ||||| | |||||| || || || | ||| ||||||||||| || || ||| Sbjct 164252 CCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGAAGGCTTCACA 164311 Query 68908 TTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAA 68967 ||||| | || | || ||||| || | | | || || || | ||||| || Sbjct 164312 TTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAGAGCCTTCGTATGTGGAGTAT 164371 Query 68968 GGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCG 69027 || |||| || | || || || || | || | | |||||||| || Sbjct 164372 GGGCCTTGCTCCTTGGCAAGCTCCATGGAAGCAGTGAGAGCGGCATGGTAAATTGTCTCA 164431 Query 69028 AAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATA 69087 || |||| ||| || || ||| |||| || || ||||| || | | || | || Sbjct 164432 AATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGACTCGAAAGGC--AGGCGAAGGGCTA 164489 Query 69088 --AATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATT--TGA 69143 || |||||||| | |||||||| || | ||| || || || || | | | || || Sbjct 164490 GGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGCATGTTGCTGT 164549 Query 69144 ACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGAC 69203 || | ||||| |||| || || || || | || || || ||||| | ||||| || Sbjct 164550 TCTGT--GCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAAGTTTCGAAC 164607 Query 69204 TACTACTT---TAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATC--TATA--- 69255 || |||| |||| ||| | || || | || ||| | | || || | || Sbjct 164608 AACAACTTCGGTAACATCGTGC---AGCTTTTGGAAGTCATAGCAGCCTTCATTGTAGTC 164664 Query 69256 -ACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGC 69314 ||||| || || | || || | || || || || ||||||| | || Sbjct 164665 CACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTCATCGGGGGC-GC 164723 Query 69315 A-TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGAT 69373 | || | || ||||| || || ||||| | ||| || || ||||| | ||| | Sbjct 164724 AGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAGATTCTTCTGGT 164783 Query 69374 TACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAG 69433 | ||||| || || || || ||||| || || || || | || |||||| |||| | Sbjct 164784 TGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGTTTCAGTCTGGG 164843 Query 69434 ATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCT- 69492 || | || | | ||||| | || || || ||||||| || ||| | Sbjct 164844 CCTCTAGGATGGCATACCAAAGCTTCTGTGCCTTGAT---GGTCTTGCGACCCTTGTTGA 164900 Query 69493 --TTTTCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 || ||||| | | ||| | |||| ||||| || || || | ||| ||| || Sbjct 164901 GCTTCTCATACTTTTCGTAGAGAGCC--TCGAACTCGTCACCGTAGCAGTCAGCCAGGCC 164958 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTT---AACTCGTTTCAT 69605 |||||||| || |||||||||| | ||| ||| | | ||| ||| || ||||| Sbjct 164959 GGGACATTCGTTGGGACACATCAGAGTCCA---ATCGCCGTTCTTTTCAACACGCTTCAT 165015 Query 69606 AAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCC 69665 || ||||| |||||||| || || | |||||||| | | | | |||||| || || Sbjct 165016 GAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTGCC 165075 Query 69666 TGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 69725 || ||| || || | ||||| | | || | |||||| || || || || || Sbjct 165076 ATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAGAT 165135 Query 69726 CGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATA 69785 || | | || || || || || || || ||||| | || | ||||||||||| | Sbjct 165136 TGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTGAA 165195 Query 69786 GACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCC 69845 ||||| |||||| ||||| | ||| || || | ||||| || || | || || || Sbjct 165196 GACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAACC 165255 Query 69846 TCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGC 69905 | || || ||| || || || || || || ||||| || ||||| | || Sbjct 165256 GGTGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTGC 165315 Query 69906 ACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAA 69965 ||| || | ||||| || || ||||| ||||| ||||| |||||| | || || Sbjct 165316 ACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGAA 165375 Query 69966 ACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGT 70025 || ||||| |||| || || |||||||| || | || || || || || || Sbjct 165376 GCATGAAGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTGT 165435 Query 70026 GAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATAT----CCCACT 70081 ||| | || || | || ||||| |||||||| || || | || || | Sbjct 165436 GAAAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCCCA 165495 Query 70082 GATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTAT 70141 | || || | || |||||||| | ||| ||||| ||||| || || | || || Sbjct 165496 G----ATACCGACAGCAACACGCATGATCATGTGCTGGGGTCGCTCAACGATCTTGCCAT 165551 Query 70142 TTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGT 70201 | ||| | ||||| ||| | || | |||||| || || ||||| | ||| |||| Sbjct 165552 CAAGTTTAAGGAGGTAGGATCTCTCTAAAGTTTTGAAACCGAAATATTGGTAGTTGAAGT 165611 Query 70202 CTCTTTCGTAAATAAT 70217 ||| || || | ||| Sbjct 165612 CTCGGTCATACACAAT 165627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908156023000