Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq16 138 1e-27
seq10 105 6e-18
>seq16
Length=1288267
Score = 138 bits (152), Expect = 1e-27
Identities = 292/430 (68%), Gaps = 7/430 (2%)
Strand=Plus/Plus
Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661
|||||||||| |||||||||| || | ||| ||||||||| |||||| |||||||| ||
Sbjct 164959 GGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTCAACACGCTTCATGAA 165018
Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721
| ||| || | ||| | ||| || ||||| | || ||||| | || ||
Sbjct 165019 GAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTGCC-AT 165077
Query 131722 AAtttttttCAAATTTAAA-AAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTG 131780
|| ||| | | | || || || | |||||||||||| || || | || | ||
Sbjct 165078 GGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAGATTG 165137
Query 131781 CCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATA 131837
| | |||||| |||| || || ||||||| |||| |||| | |||| ||| | |
Sbjct 165138 CGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTGAAGA 165197
Query 131838 CGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCAT 131897
| |||| |||||| | |||||||| | |||||||||| | ||||| ||
Sbjct 165198 CTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAACCGG 165257
Query 131898 TGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCG 131956
|||| | ||| ||| | |||||| |||||||| || ||| | || ||||| | |||
Sbjct 165258 TGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGCCAT-CTTGGAGATCATTGCA 165316
Query 131957 CATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAG 132016
|| | | || |||| || || || || | |||||| | |||||||||| |||
Sbjct 165317 CAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGAAG 165376
Query 132017 CAAGAGGACA 132026
|| || ||||
Sbjct 165377 CATGAAGACA 165386
>seq10
Length=1675152
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079
||| ||||||| || | || || || | |||||| || || || || |||||||||||
Sbjct 200472 GCCGCCGCGCAGACGGAGGACTAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCT 200413
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
|| | |||| ||||||| ||||| ||||| ||| | || ||||| || || || || ||
Sbjct 200412 CAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGGTCTGGTGG 200353
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| |||||| ||||| |||||| || | | | || | ||||| | | || ||
Sbjct 200352 GATACCCTCCTTATCCTGAATCTTGGACTTTACGTTGTCGATTGTGTCAGACGACTCTAC 200293
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| | || || | || || || || || || || ||||| |||||
Sbjct 200292 TTCCAACGTAATGGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 200245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934011583400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |