Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq16 210 3e-49
seq4 96.9 4e-15
>seq16
Length=1288267
Score = 210 bits (232), Expect = 3e-49
Identities = 919/1438 (64%), Gaps = 41/1438 (3%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA---TTGATTCT 104278
|| ||| ||||| ||||||| || || ||||||| |||||| |||| ||||
Sbjct 165531 CCCCAGCACATGATCATGCGTGTTGCTGTCGGTATC--TGGGGA-GACAATGTTGAGCGA 165475
Query 104279 GTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC 104336
||| | || || ||| || ||||||| |||| | | ||| || || | |||||||
Sbjct 165474 GTCATTGAAACCTACAACTTGATGTCCAGCAAGTTTT--TCACACATGCCTCGCCAACCC 165417
Query 104337 TCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGG 104396
|||||||||| || || || | ||| |||| |||||||| ||| || ||||
Sbjct 165416 TCTTCAATGCGGGCACCCCTCAGGCTCAACTGTCTTCATGCTTCCTAGTCGACATGAAGG 165357
Query 104397 AGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGG 104456
| ||| || | || || || | || || | | ||||| ||||| ||| ||
Sbjct 165356 ATGACAGCATTGAGGGCATTTACGACACCCTCAAGACCTGTGCAATGATCTCCAAGATGG 165297
Query 104457 CTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGA 104516
|||| |||||||| | ||||||| | | | |||| || || ||| |
Sbjct 165296 CTGGTGGTATTGGCCTCAACATCCACCGTATCCGTGCCACCGGTTCATACATCGCGGGCA 165237
Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576
| ||||| || | ||| | ||||| ||||| || || || || ||| || || |
Sbjct 165236 CCAATGGCACTTCCAACGGTGTCATTCCCATGCTGCGAGTCTTCAATAACACTGCTCGTT 165177
Query 104577 ATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCAT 104630
|||| |||||| ||| ||| | | || || ||||| |||| |||||||| |
Sbjct 165176 ATGTGGATCAAGGTGGCAACAAGCGCCCA---GGCGCTTTCGCAATCTACCTTGAGCCTT 165120
Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690
|||| ||||| | | |||||| | || | || ||||| || | || || | |
Sbjct 165119 GGCATGCGGACGTGTTCGAGTTCATGGACCTCCGAAAGAACCATGGCAAGGAAGAAGTTC 165060
Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750
| || ||||||||| ||| || |||||||| ||||||||||||||| | |||||
Sbjct 165059 GCGCACGTGATCTCTTCCTCGCCCTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGAAA 165000
Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810
||| ||| ||||| |||| | ||||| || | || || || | || | |
Sbjct 164999 AGAACGGCGATTGGACTCTGATGTGTCCCAACGAATGTCCCGGCCTGGCTGACTGCTACG 164940
Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAG-----GAAGAA-GGTCGGGCGACTG 104864
|||| ||||| || || || ||| |||||| ||| || || ||||| |||
Sbjct 164939 GTGACGAGTTCGAGGCTCTCTACGAAAAGTATGAGAAGCTCAACAAGGGTCGCAAGACCA 164880
Query 104865 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924
| || ||| || | ||| | || || || || | || || || || || |
Sbjct 164879 TCAAGG-CACAGAAGC-----TTTGGTATGCCATCCTAGAGGCCCAGACTGAAACCGGAA 164826
Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984
|| | |||||| |||||||| || || || | ||||| || || |||||| | ||
Sbjct 164825 ACCCTTTCATGCTCTACAAAGATGCTTGCAATCGCAAGAGCAACCAGAAGAATCTTGGCA 164766
Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044
||| || ||||||||||| || || ||| | || | | | |||||| |
Sbjct 164765 CCATCCGCAGCTCCAATCTCTGCACGGAGATCATCGAGTACTGCGCCCCCGATGAGGTCG 164706
Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC-- 105102
| || || ||| | || || | || | || | |||||| | | | | ||| |
Sbjct 164705 CCGTCTGCAACTTGGCTTCGCTGGCCTTGCCGTCCTTTGTGGA-CTACA-ATGAAGGCTG 164648
Query 105103 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162
| ||| | |||| || ||||| ||||| || ||| |||| | || | |
Sbjct 164647 CTATGACTTCCAAAAGCTGCACGATGTTACCGAAGTTGTTGTTCGAAACTTGAATAAGAT 164588
Query 105163 TATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 105222
|| || || | ||||||||| | || | || || ||| | ||| | ||
Sbjct 164587 CATCGACGTCAACTACTACCCCGTTCCGGAAGCACAGAACAGCAACATGCGCCACAGGCC 164528
Query 105223 AATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA 105282
|||||| |||| ||||||||||| || |||| ||| | ||||| | || ||
Sbjct 164527 CATTGGTGTCGGCGTTCAGGGTCTTGCAGATGCGTTCCTAGCCCTTCGCCTGCCTTTCGA 164468
Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342
|| || || || | || || ||||||||||| || || || ||||||||
Sbjct 164467 GTCTCCTGAGGCACGAGAGCTGAACAAGCAGATATTTGAGACAATTTACCATGCCGCTCT 164408
Query 105343 TGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400
|| | || ||| | || ||| | || ||||| || | || || |||
Sbjct 164407 CACTGC--TTCCATGGAGCTTGCCAAGGAGCAAGGCCCATACTCCACATACGAAGGCTCT 164350
Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTA 105459
|| | || ||||| | || || ||||| |||| |||| |||| || | || |
Sbjct 164349 CCTGTATCTCAAGGCATTCTGCAGTTTGACATGT-GGAATGTGAAGCCTTCCGATCTTTG 164291
Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519
||||||| | | || ||||| | ||||||| | | || |||| |||||||| || |
Sbjct 164290 GGACTGGGCATCGCTGAAGGAGCAAATCAAGGCGCATGGCATTCGCAACAGTCTGCTAGT 164231
Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579
|| |||||||| || ||| || | || ||||||||||| || || |||||||| ||
Sbjct 164230 AGCACCAATGCCTACCGCCAGTACTTCCCAGATCTTGGGTAACAACGAGTGCTTTGAGCC 164171
Query 105580 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637
||||| | || ||||| | | ||| ||| || || ||||| | | ||||||
Sbjct 164170 GTACACATCCAATATCTACCAACGCAGAGTCCTTGCTGGCGAGTTCCAGGTCGTCAAC 164113
>seq4
Length=2394644
Score = 96.9 bits (106), Expect = 4e-15
Identities = 155/216 (72%), Gaps = 10/216 (5%)
Strand=Plus/Plus
Query 94733 CAGTTCCGTGTATTCA-AAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAG 94788
||||||| || ||| |||||| || || ||||| || ||| || || | |||
Sbjct 143431 CAGTTCC-TGCCATCAGAAAGAAGGCTGACTGGGCCATTCGATGGATTACCGACAAGAAG 143489
Query 94789 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 94848
|| | |||| ||| | || || | || || || || || ||||||||||||
Sbjct 143490 TC---TACCTTCGCTCAACGTCTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGC 143546
Query 94849 GGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907
||| |||| ||| | || | ||| | |||||||| || ||||||||||||||| ||
Sbjct 143547 GGTGCCTT-TGCTTCCATCTTCTGGTTGAAGAAGCGTGGCCTCATGCCAGGTCTCACATT 143605
Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 94943
|||||||||||| ||||| || |||||||| |||||
Sbjct 143606 CTCCAACGAGCTCATCTCGCGAGACGAGGGTCTCCA 143641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260253193000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |