Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq2 212 2e-49
seq10 118 3e-21
seq1 87.8 5e-12
>seq2
Length=3202410
Score = 212 bits (234), Expect = 2e-49
Identities = 929/1462 (64%), Gaps = 10/1462 (1%)
Strand=Plus/Plus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
|| || || |||||| | || || || || || ||||||| | | | | | ||| |
Sbjct 681308 GCCATCGGTATCGATCTTGGAACCACATACTCGTGTGTTGGTATCTATCGCGAGGATAGA 681367
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
| || || || || || || || || || |||| || || || | ||| ||||| ||
Sbjct 681368 ATCGAGATCATCGCGAACGACCAGGGAAATCGAACCACCCCGTCGTTCGTGGCATTCACG 681427
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || |||||| |||| || ||| | || || || |||| || || || | ||
Sbjct 681428 GACACCGAGCGTCTGATCGGAGATGCCGCCAAGAACCAAGTCGCGATGAACCCCCACAAC 681487
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438
|| || || ||||| ||||| || ||||| | | || || ||| || |
Sbjct 681488 ACAGTCTTCGATGCGAAGCGCCTCATTGGCCGCAAGTTCTCCGACTCGGAGGTGCAGGCC 681547
Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498
||| | || || || || || | | | || | ||| || | | || | | |||
Sbjct 681548 GATATGAAGCACTTCCCATTCAA-GATCATCGACAAGGCGAGCA--AGCCTGTGGTCGAG 681604
Query 349499 GTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557
| || | || || || || || || || ||| || || || || ||| | ||
Sbjct 681605 ATCGAGTTCAAGGGCGAGACCAAGACC-TTCACACCTGAGGAGATCAGCTCCATGATCTT 681663
Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617
|| || ||| || | |||||| | || | |||| | || | | || |||||
Sbjct 681664 GGTAAAGATGCGAGAGACTGCTGAGTCTTACCTTGGTGTCCCGGTCAACAACGCCGTTAT 681723
Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677
||||| || ||||| || || ||| | ||||| || || || || ||||| |||
Sbjct 681724 CACTGTCCCCGCCTACTTCAACGATTCTCAGCGACAAGCCACCAAGGACGCTGGTCTCAT 681783
Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737
|| || | || ||||| |||| || ||||| || |||||||| || ||||| || ||
Sbjct 681784 CGCAGGCCTCAACGTTCTCCGAATCATCAATGAGCCTACTGCTGCCGCCATTGCTTACGG 681843
Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797
||||| || | || ||| || |||| |||| || |||||| | |||||||| ||
Sbjct 681844 TCTTGACAAGAAGATTGAGGGCGAGCGAAATGTTCTCATCTTTGATCTCGGTGGTGGCAC 681903
Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857
||| ||||| || || || || | || || || || || || || || | || |||||
Sbjct 681904 TTTCGATGTTTCTCTCCTGACTATCGAGGAAGGTATCTTCGAGGTCAAGTCGACCGCTGG 681963
Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGA 349917
|||||| || | ||||| || || || || || ||||| || || || || || ||
Sbjct 681964 TGATACCCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTCAACGA 682023
Query 349918 ATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAA 349976
|| ||||| ||||| || | || | || | | || |||| || ||
Sbjct 682024 GTTCAAGCG-CAAGCACAAGAAGGACCTGTCCTCCAACGCCCGTGCGCTGCGACGACTCC 682082
Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036
||||||| || || ||||| ||||| || | || || | |||| ||||| || || |
Sbjct 682083 GAACTGCCTGCGAGCGTGCCAAGCGCACCCTGTCCTCGTCGGCCCAGACCTCCATCGAGA 682142
Query 350037 TTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAG 350096
| || ||||| ||| || | ||||||| | || || || || || || || ||||
Sbjct 682143 TCGACTCTCTCTTTGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCGATTCGAAG 682202
Query 350097 AATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATG 350156
| || || |||||| || || | || | | ||||| || || | ||||
Sbjct 682203 AGTTGTGCCAGGATCTCTTCCGATCCACCCTCCAGCCTGTCGACCGTGTCCTCTCGGATG 682262
Query 350157 CAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTC 350216
| || || ||| ||| | | || | || | || || ||||| || ||||| |
Sbjct 682263 CCAAGATCGACAAGTCCCAGGTCCACGAGATCGTCCTTGTCGGCGGTTCCACCCGTATCC 682322
Query 350217 CAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTA 350276
| | | || || | | | || | || || || || || || | || || |
Sbjct 682323 CCCGAATCCAGAAGCTCATCACCGACTACTTCAACGGAAAGGAGCCCAACAAGTCCATCA 682382
Query 350277 ATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATA 350336
| || ||||| |||||||| || || || ||||| ||||| | || || ||||| | |
Sbjct 682383 ACCCCGATGAGGCTGTTGCCTACGGCGCCGCTGTCCAGGCCGCCATCTTGTCTGGTGACA 682442
Query 350337 AGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGAT 350393
|| || || || | || || || ||||| | || || || || ||
Sbjct 682443 CCTCCTCCAAGGGAACCAGCGAGATCTTGCTTCTCGATGTTGCCCCGCTCTCTCTCGGTA 682502
Query 350394 TAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAA 350453
| || ||| |||||| | ||||| || || || |||| | ||| | ||||| |
Sbjct 682503 TCGAGACTGCTGGTGGCATGATGACCAAGCTCATCCCGCGAAACACCACTATCCCTACCA 682562
Query 350454 AAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTAT 350513
| |||||| | || ||||| || |||| || ||||| | || || || || |
Sbjct 682563 AGAAGTCCGAGGTCTTCTCTACCTTCTCAGACAACCAGCCTGGTGTGCTCATCCAGGTCT 682622
Query 350514 TTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTG 350573
|| ||||| ||| ||||| || || || || || || | || || | |
Sbjct 682623 ACGAGGGTGAGCGTCAGCGCACCAAGGACAACAACCTTCTCGGCAAGTTCGAGCTTACCG 682682
Query 350574 AAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAA 350633
|| ||||| || |||| ||||||||||| || ||| | |||||| ||||| | |
Sbjct 682683 GCATCCCACCTGCACCCCGAGGTGTTCCTCAGATCGAGGTCACCTTCGATCTTGATGCCA 682742
Query 350634 ATGGTATTTTAAATGTTACCGC 350655
||||||| | || ||| ||||
Sbjct 682743 ATGGTATCATGAACGTTTCCGC 682764
>seq10
Length=1675152
Score = 118 bits (130), Expect = 3e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 140535 TGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGT 140594
|| || |||||||| || || || || || || | || || || ||||| || ||
Sbjct 200447 TGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCTTCCAGCTGC 200388
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| ||||| ||||| ||||||||||| || || || || || || ||||||||||| ||
Sbjct 200387 TTACCAGCGAAGATAAGACGTTGCTGGTCTGGTGGGATACCCTCCTTATCCTGAATCTTG 200328
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
| ||||| || || || | ||||| | || ||||| | |||| |||||||||||
Sbjct 200327 GACTTTACGTTGTCGATTGTGTCAGACGACTCTACTTCCAACGTAATGGTCTTTCCGGTG 200268
Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || ||||||||
Sbjct 200267 AGGGTCTTGACGAAGATCTGCAT 200245
Score = 91.5 bits (100), Expect = 4e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 140547 TCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAG 140606
|| || || || || || || || | ||||| ||||| || || || || |||||||||
Sbjct 199826 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 199767
Query 140607 ATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTA 140666
|| || || ||||| || || |||||||| || || ||||| || || | || || ||
Sbjct 199766 ATCAGGCGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 199707
Query 140667 TCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719
|| || | ||| || | || || ||||| || | |||||||| || | |||
Sbjct 199706 TCGATAGTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGACTGT 199654
>seq1
Length=3506016
Score = 87.8 bits (96), Expect = 5e-12
Identities = 131/183 (72%), Gaps = 5/183 (3%)
Strand=Plus/Minus
Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAA--CAGTAACTGATGCTGTTATTA 349619
||||||||||| | |||||| || ||||| || || |||| | |||| || | |
Sbjct 2358103 AAAATGAAGGAGACTGCTGAGGCCTATTT--GTCCAAGCCAGTCAAGAATGCCGTCGTCA 2358046
Query 349620 CTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTG 349679
| || ||||||||||| |||||| |||| ||| || || || || |||||| |||
Sbjct 2358045 CAGTGCCAGCCTATTTCAATGATTCCCAACGTCAAGCTACCAAGGACGCTGGCCAAATTT 2357986
Query 349680 CGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGC 349739
| || || || ||||| || | | || || ||||||||||| || |||| || |||
Sbjct 2357985 CCGGATTGAACGTTCTCCGAGTCGTCAACGAGCCCACTGCTGCCGCCCTTGCCTA-CGGC 2357927
Query 349740 TTG 349742
|||
Sbjct 2357926 TTG 2357924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515252943935225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |