Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02- 10] 75 sequences; 42,602,674 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq16 286 4e-72 seq4 111 2e-19 >seq16 Length=1288267 Score = 286 bits (316), Expect = 4e-72 Identities = 919/1417 (65%), Gaps = 32/1417 (2%) Strand=Plus/Plus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGC-CT 78565 ||||||||| || ||| | ||| ||||||| |||| ||||||||||| ||||| || Sbjct 164125 GAACTCGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTC-AAAGCACT 164183 Query 78566 CGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAAT 78625 ||||||| |||| |||||||| || |||||| ||||| ||||| || || ||| | Sbjct 164184 CGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGT 164243 Query 78626 TCCGAAGACCATGCGTCTTGATCTCGACCTTTAG----GCC--GTCCCAAAATTCATTCG 78679 | |||| ||||||| |||||| | |||| || ||| |||||||| || | Sbjct 164244 TGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGAAG 164303 Query 78680 CCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACG 78739 | | ||||||||| || || || || | || | || || || | | | | Sbjct 164304 GCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAGAGCCTTCGTATG 164363 Query 78740 TCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGC-AGGGCCGCGTGGTAC 78798 | ||| | || | ||||||||| || || |||| || || || || ||||| Sbjct 164364 TGGAGTATGGGCCTTGCTCCTTGGCAAGCTC-CATGGAAGCAGTGAGAGCGGCATGGTAA 164422 Query 78799 ACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCG 78858 | | ||| || || |||||| ||||| || |||| | ||||| | |||| Sbjct 164423 ATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGACTCGAAAGGCAGGCGA 164482 Query 78859 AGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATG 78918 || | ||| |||| || || ||||| ||||||| | | || || | |||||||||| Sbjct 164483 AGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGCATG 164542 Query 78919 TTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTA 78978 ||||| || | || || ||||| |||| ||||||| |||| ||| Sbjct 164543 TTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAAGTTT 164602 Query 78979 CGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTTTGATG 79038 || || || || || |||| || || ||| ||| | | | ||| | Sbjct 164603 CGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGCCTTCATTGTAG 164662 Query 79039 ------AAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTA 79092 || | ||| | | |||||| |||| |||||| ||||| ||| || ||| Sbjct 164663 TCCACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTCATCGGGGGCG 164722 Query 79093 GAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGG 79152 | ||||||||| || ||||| | ||| || ||||||||| | ||||||||| Sbjct 164723 CAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAGATTCTTCTGG 164782 Query 79153 TTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA 79212 |||||||| || || || || |||||| |||| | || | ||||| ||| ||| Sbjct 164783 TTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGTTTCAGTCTGG 164842 Query 79213 CTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGT 79272 || || | | | | ||| | | | | ||| || ||||| ||||||| Sbjct 164843 GCCTCTAGGATGGCATACCAAAGCTTCTGTGCCTTGATGG---TCTTG---CGACCCTTG 164896 Query 79273 GCGA------CGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGG 79326 || | ||| | ||| | | | ||| | || || ||| || | |||| Sbjct 164897 TTGAGCTTCTCATACTTTTCGTAGAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCCAGG 164956 Query 79327 CCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATG 79386 || || || |||| || |||||||| ||| || ||| ||| ||||| || |||| Sbjct 164957 CCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTCAACACGCTTCATG 165016 Query 79387 AAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCC 79446 ||||| || || ||||||||||| |||||| || || || | || || | ||| Sbjct 165017 AAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTGCCA 165076 Query 79447 TGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATG 79506 |||||| || || || | || || | | ||| || ||||| ||||| || ||||| Sbjct 165077 TGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAGATT 165136 Query 79507 GCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAA 79566 ||||| | || ||||||| ||| || || | || || || || ||||| ||||| Sbjct 165137 GCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTGAAG 165196 Query 79567 ACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCG 79626 ||||| |||||||| | || |||| || ||| || || || ||| || |||| Sbjct 165197 ACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAACCG 165256 Query 79627 CTCGCCCGAAT--GTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCG 79684 | || || || | | || || || || || || || | | ||||||||| | Sbjct 165257 GTGGCACGGATACGGTGGA--TGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTG 165314 Query 79685 CGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGA 79744 | || |||||| || ||||| |||||||| || ||| |||||||| |||| |||| Sbjct 165315 CACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGA 165374 Query 79745 AGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCG 79804 |||| |||| || | | || || || ||||||||||| |||| || || | Sbjct 165375 AGCATGAAGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTG 165434 Query 79805 TGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGT 79864 |||| ||||| | ||||| | ||| || || |||| ||| | | ||| || Sbjct 165435 TGAAAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCCC 165494 Query 79865 GGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901 ||| ||||| || || ||||||| | || |||||| Sbjct 165495 AGATACCGACAGCAACACGCATGATCATGTGCTGGGG 165531 Score = 255 bits (282), Expect = 6e-63 Identities = 904/1394 (65%), Gaps = 40/1394 (3%) Strand=Plus/Minus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| || || ||||| ||| || ||| | | ||||||| Sbjct 165531 CCCCAGCACATGATCATGCGTGTTGCTGTCGGTATCTGGGGAGACAATGTTGAGCGAGTC 165472 Query 19163 CGCGAGACATACGACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 || || ||| || ||||| |||| ||||| ||||| || || |||| ||||| || Sbjct 165471 ATTGAAACCTACAACTTGATGT-CCAGCAAGTTTTTCACACATGCCTCGCCAACCCTCTT 165413 Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281 ||| || || || | | || |||| || |||||||| | ||||||||||| Sbjct 165412 CAATGCGGGCACCCCTCAGGCTCAACTGTCTTCATGCTTCCTAGTCGACATGAAGGATGA 165353 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341 ||||||||||||||| ||||| || |||||| || || ||||||||| | | || Sbjct 165352 CAGCATTGAGGGCATTTACGACACCCTCAAGACCTGTGCAATGATCTCCAAGATGGCTGG 165293 Query 19342 GGGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401 ||||| || || || | |||||| | | ||| || ||| || || || Sbjct 165292 TGGTATTGGCCTCAACATCCACCGTATCCGTGCCACCGGTTCATACATCGCGGGCACCAA 165233 Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 || || ||||| || | || ||||| || |||||||| ||||| || | || || Sbjct 165232 TGGCACTTCCAACGGTGTCATTCCCATGCTGCGAGTCTTCAATAACACTGCTCGTTATGT 165173 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | || || ||| ||| ||| ||| | ||||| |||||||| ||||| ||||| || Sbjct 165172 GGATCAAGGTGGCAACAAGCGCCCAGGCGCTTTCGCAATCTACCTTGAGCCTTGGCATGC 165113 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 |||||| | || ||| | || || || |||||| || | || || | ||| || Sbjct 165112 GGACGTGTTCGAGTTCATGGACCTCCGAAAGAACCATGGCAAGGAAGAAGTTCGCGCACG 165053 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 || |||||| ||| |||||||||| || || |||||| || ||||| ||| ||| Sbjct 165052 TGATCTCTTCCTCGCCCTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGAAAAGAACGG 164993 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701 || ||| |||||||| || ||||||| || ||||| | ||| |||||| || | Sbjct 164992 CGATTGGACTCTGATGTGTCCCAACGAATGTCCCGGCCTGGCTGACTGCTACGGTGACGA 164933 Query 19702 GTTCAATGAGTTGTACCGGACTTA--CGTAGC----CCAGGGCCGGTTCAAGAAGGTGGT 19755 |||| | | | ||| | || | ||| | |||| || ||||| | Sbjct 164932 GTTCGAGGCTCTCTACGAAAAGTATGAGAAGCTCAACAAGGGTCG---CAAGA---CCAT 164879 Query 19756 CCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTA 19815 | ||| | | | | ||| | | |||| | |||| || ||||| | || | Sbjct 164878 CAAGGCACAGAAGCTTTGGTATGCCATCCTAGAGGCCCAGACTGAAACCGGAAACCCTTT 164819 Query 19816 CATGTGCTACAAGGACGC-CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCA 19874 |||| |||||| || || || | || |||| || |||||||| | ||| | ||| Sbjct 164818 CATGCTCTACAAAGATGCTTGCAATCG-CAAGAGCAACCAGAAGAATCTTGGCACCATCC 164760 Query 19875 AGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGT 19934 ||||| || || || || ||||| ||| | | || || ||| ||||| | Sbjct 164759 GCAGCTCCAATCTCTGCACGGAGATCATCGAGTACTGCGCCCCCGATGAGGTCGCCGTCT 164700 Query 19935 GTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGT------CAAGGCCTCCTCCTTCGACT 19988 | || |||| || ||| | ||||| | || || ||| | || || |||| Sbjct 164699 GCAACTTGGCTTCGCTGGCCTTGCCGTCCTTTGTGGACTACAATGAAGGCTGCTATGACT 164640 Query 19989 TTGCCAAA--TTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGA 20046 | ||||| || |||| || ||| || || || || ||||| ||||||| Sbjct 164639 T--CCAAAAGCTGCACGATGTTACCGAAGTTGTTGTTCGAAACTTGAATAAGATCATCGA 164582 Query 20047 TCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGC 20106 |||| ||||| || || | || || ||||||||| |||| || | Sbjct 164581 CGTCAACTACTACCCCGTTCCGGAAGCACAGAACAGCAACATGCGCCACAGGCCCATTGG 164522 Query 20107 GATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCC 20166 ||||||| ||||| || || || | ||| | || |||| | ||||| ||| Sbjct 164521 TGTCGGCGTTCAGGGTCTTGCAGATGCGTTCCTAGCCCTTCGCCTGCCTTTCGAGTCTCC 164462 Query 20167 CAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTC-CTGG 20225 |||| || ||||| |||||| || || ||| | | ||||| || || ||| ||| Sbjct 164461 TGAGGCACGAGAGCTGAACAAGCAGATATTTGAGACAATTTACCATGCCGCTCTCACTGC 164402 Query 20226 AATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGT 20285 | || || || ||||| ||| | ||||| ||| || | | | || || || | | Sbjct 164401 TTCCATG-GAGCTTGCCAAGGAGCAAGGCCCATACTCCACATACGAAGGCTCTCCTGTAT 164343 Query 20286 CCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCA---CTGAGAATGAGTTTTGGA--- 20339 | | || || || ||| ||||||||| || | || || ||| ||| Sbjct 164342 CTCAAGGCATTCTGCAGTTTGACATGTGGAATGTGAAGCCTTCCGAT--CTTTGGGACTG 164285 Query 20340 -GC-GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCC 20397 || | || |||| | |||||| | || || |||||||| |||| || || || Sbjct 164284 GGCATCGCTGAAGGAGCAAATCAAGGCGCATGGCATTCGCAACAGTCTGCTAGTAGCACC 164225 Query 20398 CATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAG-GCTTTCGAGCCGTACA 20456 ||||| |||||| || |||||||| |||| ||||||||| ||||| |||||||||| Sbjct 164224 AATGCCTACCGCCAGTACTTCCCAGATCTTGGGTAACAACGAGTGCTTT-GAGCCGTACA 164166 Query 20457 CGACCAACATCTAC 20470 | |||| |||||| Sbjct 164165 CATCCAATATCTAC 164152 Score = 86.0 bits (94), Expect = 7e-12 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||||| || ||||| ||||| |||||| ||| | ||||| || | | |||| Sbjct 163814 TAGTACATTCCGGTCTTAAGACCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTG 163873 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| | |||||| | ||| |||||| | ||||| ||||| || ||| | |||||| Sbjct 163874 CCCATAGTCGGGTCTTTCATATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCG 163933 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 |||||||| ||||| | || || | || | || ||||||| ||| ||| | | Sbjct 163934 CGGTCGGCAGCCATCTGGACAACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGG 163993 Query 78379 GCCTTCAGCTCTTCCTGGATGT 78400 || || | ||| | |||||| Sbjct 163994 GCTTTGATATCTGCGGGGATGT 164015 >seq4 Length=2394644 Score = 111 bits (122), Expect = 2e-19 Identities = 303/455 (67%), Gaps = 18/455 (4%) Strand=Plus/Plus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 || || |||||||| | || || || ||| ||||| ||||||||| || | || Sbjct 143496 TTCGCTCAACGTCTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGCGGTGCCTTT 143555 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | | || |||||| | || ||||||||||||||||| || || | |||||||||||| Sbjct 143556 GCTTCCATCTTCTGGTTGAAGAAGCGTGGCCTCATGCCAGGTCTCACATTCTCCAACGAG 143615 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCACACCTA 60152 || || || || |||||||| |||||| || || || || | | |||||| | | | Sbjct 143616 CTCATCTCGCGAGACGAGGGTCTCCATACTGATTTCGC-CTGTCTC-CTATTCTCTC--A 143671 Query 60153 TTGGAAAAAT-GCCCTTCCAAGGATATTCACAAGATTGT--TCAGTG-GGCTTGTGAAGT 60208 | || ||| | || ||| | | | || ||| || || ||| || | Sbjct 143672 CTTGAGGAATCGACCAAGCAAACAAGTGGTCCAGGATGTTATCGTTGACGCTGTCAAAAT 143731 Query 60209 GGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGA 60268 ||| |||||| | || || || || ||||| || | || ||| |||| Sbjct 143732 TGAGCAAGAGTTCCTGACCGAGGCTCTGCCATGTGGTCTTCTTGGCATGAACGCGACCCT 143791 Query 60269 AATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTG-----GAGAA 60323 |||| |||||| || |||| || || || || ||| ||| | ||| ||||| Sbjct 143792 GATGAAGCAGTATATCGAGTTCGTTGCCGATCGACTCCTGGTCGCTCTTGGCAACGAGAA 143851 Query 60324 GGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGG 60383 || || || | ||| ||||| ||||||| ||||||| |||||| | | || Sbjct 143852 GG---TATATAAG--GTGTCCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGCGGC 143906 Query 60384 AAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 |||||||||||||| |||||||| |||| ||||| Sbjct 143907 AAGACCAACTTCTTCGAGAAGCGAGTCGCCGATTA 143941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524285758000