Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq16 286 4e-72
seq4 111 2e-19
>seq16
Length=1288267
Score = 286 bits (316), Expect = 4e-72
Identities = 919/1417 (65%), Gaps = 32/1417 (2%)
Strand=Plus/Plus
Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGC-CT 78565
||||||||| || ||| | ||| ||||||| |||| ||||||||||| ||||| ||
Sbjct 164125 GAACTCGCCAGCAAGGACTCTGCGTTGGTAGATATTGGATGTGTACGGCTC-AAAGCACT 164183
Query 78566 CGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAAT 78625
||||||| |||| |||||||| || |||||| ||||| ||||| || || ||| |
Sbjct 164184 CGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATTGGTGCTACTAGCAGACTGT 164243
Query 78626 TCCGAAGACCATGCGTCTTGATCTCGACCTTTAG----GCC--GTCCCAAAATTCATTCG 78679
| |||| ||||||| |||||| | |||| || ||| |||||||| || |
Sbjct 164244 TGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCCCAGTCCCAAAGATCGGAAG 164303
Query 78680 CCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACG 78739
| | ||||||||| || || || || | || | || || || | | | |
Sbjct 164304 GCTTCACATTCCACATGTCAAACTGCAGAATGCCTTGAGATACAGGAGAGCCTTCGTATG 164363
Query 78740 TCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGC-AGGGCCGCGTGGTAC 78798
| ||| | || | ||||||||| || || |||| || || || || |||||
Sbjct 164364 TGGAGTATGGGCCTTGCTCCTTGGCAAGCTC-CATGGAAGCAGTGAGAGCGGCATGGTAA 164422
Query 78799 ACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCG 78858
| | ||| || || |||||| ||||| || |||| | ||||| | ||||
Sbjct 164423 ATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCAGGAGACTCGAAAGGCAGGCGA 164482
Query 78859 AGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATG 78918
|| | ||| |||| || || ||||| ||||||| | | || || | ||||||||||
Sbjct 164483 AGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACACCAATGGGCCTGTGGCGCATG 164542
Query 78919 TTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTA 78978
||||| || | || || ||||| |||| ||||||| |||| |||
Sbjct 164543 TTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACGTCGATGATCTTATTCAAGTTT 164602
Query 78979 CGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTTTGATG 79038
|| || || || || |||| || || ||| ||| | | | ||| |
Sbjct 164603 CGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAGTCATAGCAGCCTTCATTGTAG 164662
Query 79039 ------AAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTA 79092
|| | ||| | | |||||| |||| |||||| ||||| ||| || |||
Sbjct 164663 TCCACAAAGGACGGCAAGGCCAGCGAAGCCAAGTTGCAGACGGCGACCTCATCGGGGGCG 164722
Query 79093 GAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGG 79152
| ||||||||| || ||||| | ||| || ||||||||| | |||||||||
Sbjct 164723 CAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCGGATGGTGCCAAGATTCTTCTGG 164782
Query 79153 TTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA 79212
|||||||| || || || || |||||| |||| | || | ||||| ||| |||
Sbjct 164783 TTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAAAGGGTTTCCGGTTTCAGTCTGG 164842
Query 79213 CTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGT 79272
|| || | | | | ||| | | | | ||| || ||||| |||||||
Sbjct 164843 GCCTCTAGGATGGCATACCAAAGCTTCTGTGCCTTGATGG---TCTTG---CGACCCTTG 164896
Query 79273 GCGA------CGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGG 79326
|| | ||| | ||| | | | ||| | || || ||| || | ||||
Sbjct 164897 TTGAGCTTCTCATACTTTTCGTAGAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCCAGG 164956
Query 79327 CCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATG 79386
|| || || |||| || |||||||| ||| || ||| ||| ||||| || ||||
Sbjct 164957 CCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTTCTTTTCAACACGCTTCATG 165016
Query 79387 AAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCC 79446
||||| || || ||||||||||| |||||| || || || | || || | |||
Sbjct 165017 AAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGCGCGAACTTCTTCCTTGCCA 165076
Query 79447 TGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATG 79506
|||||| || || || | || || | | ||| || ||||| ||||| || |||||
Sbjct 165077 TGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATGCCAAGGCTCAAGGTAGATT 165136
Query 79507 GCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAA 79566
||||| | || ||||||| ||| || || | || || || || ||||| |||||
Sbjct 165137 GCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATAACGAGCAGTGTTATTGAAG 165196
Query 79567 ACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCG 79626
||||| |||||||| | || |||| || ||| || || || ||| || ||||
Sbjct 165197 ACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGTGCCCGCGATGTATGAACCG 165256
Query 79627 CTCGCCCGAAT--GTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCG 79684
| || || || | | || || || || || || || | | ||||||||| |
Sbjct 165257 GTGGCACGGATACGGTGGA--TGTTGAGGCCAATACCACCAGCCATCTTGGAGATCATTG 165314
Query 79685 CGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGA 79744
| || |||||| || ||||| |||||||| || ||| |||||||| |||| ||||
Sbjct 165315 CACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATCCTTCATGTCGACTAGGA 165374
Query 79745 AGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCG 79804
|||| |||| || | | || || || ||||||||||| |||| || || |
Sbjct 165375 AGCATGAAGACAGTTGAGCCTGAGGGGTGCCCGCATTGAAGAGGGTTGGCGAGGCATGTG 165434
Query 79805 TGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGT 79864
|||| ||||| | ||||| | ||| || || |||| ||| | | ||| ||
Sbjct 165435 TGAAAAACTTGCTGGACATCAAGTTGTAGGTTTCAATGACTCGCTCAACATTGTCTCCCC 165494
Query 79865 GGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901
||| ||||| || || ||||||| | || ||||||
Sbjct 165495 AGATACCGACAGCAACACGCATGATCATGTGCTGGGG 165531
Score = 255 bits (282), Expect = 6e-63
Identities = 904/1394 (65%), Gaps = 40/1394 (3%)
Strand=Plus/Minus
Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162
|| ||| || | ||||||| || || ||||| ||| || ||| | | |||||||
Sbjct 165531 CCCCAGCACATGATCATGCGTGTTGCTGTCGGTATCTGGGGAGACAATGTTGAGCGAGTC 165472
Query 19163 CGCGAGACATACGACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221
|| || ||| || ||||| |||| ||||| ||||| || || |||| ||||| ||
Sbjct 165471 ATTGAAACCTACAACTTGATGT-CCAGCAAGTTTTTCACACATGCCTCGCCAACCCTCTT 165413
Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281
||| || || || | | || |||| || |||||||| | |||||||||||
Sbjct 165412 CAATGCGGGCACCCCTCAGGCTCAACTGTCTTCATGCTTCCTAGTCGACATGAAGGATGA 165353
Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341
||||||||||||||| ||||| || |||||| || || ||||||||| | | ||
Sbjct 165352 CAGCATTGAGGGCATTTACGACACCCTCAAGACCTGTGCAATGATCTCCAAGATGGCTGG 165293
Query 19342 GGGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401
||||| || || || | |||||| | | ||| || ||| || || ||
Sbjct 165292 TGGTATTGGCCTCAACATCCACCGTATCCGTGCCACCGGTTCATACATCGCGGGCACCAA 165233
Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461
|| || ||||| || | || ||||| || |||||||| ||||| || | || ||
Sbjct 165232 TGGCACTTCCAACGGTGTCATTCCCATGCTGCGAGTCTTCAATAACACTGCTCGTTATGT 165173
Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521
| || || ||| ||| ||| ||| | ||||| |||||||| ||||| ||||| ||
Sbjct 165172 GGATCAAGGTGGCAACAAGCGCCCAGGCGCTTTCGCAATCTACCTTGAGCCTTGGCATGC 165113
Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581
|||||| | || ||| | || || || |||||| || | || || | ||| ||
Sbjct 165112 GGACGTGTTCGAGTTCATGGACCTCCGAAAGAACCATGGCAAGGAAGAAGTTCGCGCACG 165053
Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641
|| |||||| ||| |||||||||| || || |||||| || ||||| ||| |||
Sbjct 165052 TGATCTCTTCCTCGCCCTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGAAAAGAACGG 164993
Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701
|| ||| |||||||| || ||||||| || ||||| | ||| |||||| || |
Sbjct 164992 CGATTGGACTCTGATGTGTCCCAACGAATGTCCCGGCCTGGCTGACTGCTACGGTGACGA 164933
Query 19702 GTTCAATGAGTTGTACCGGACTTA--CGTAGC----CCAGGGCCGGTTCAAGAAGGTGGT 19755
|||| | | | ||| | || | ||| | |||| || ||||| |
Sbjct 164932 GTTCGAGGCTCTCTACGAAAAGTATGAGAAGCTCAACAAGGGTCG---CAAGA---CCAT 164879
Query 19756 CCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTA 19815
| ||| | | | | ||| | | |||| | |||| || ||||| | || |
Sbjct 164878 CAAGGCACAGAAGCTTTGGTATGCCATCCTAGAGGCCCAGACTGAAACCGGAAACCCTTT 164819
Query 19816 CATGTGCTACAAGGACGC-CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCA 19874
|||| |||||| || || || | || |||| || |||||||| | ||| | |||
Sbjct 164818 CATGCTCTACAAAGATGCTTGCAATCG-CAAGAGCAACCAGAAGAATCTTGGCACCATCC 164760
Query 19875 AGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGT 19934
||||| || || || || ||||| ||| | | || || ||| ||||| |
Sbjct 164759 GCAGCTCCAATCTCTGCACGGAGATCATCGAGTACTGCGCCCCCGATGAGGTCGCCGTCT 164700
Query 19935 GTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGT------CAAGGCCTCCTCCTTCGACT 19988
| || |||| || ||| | ||||| | || || ||| | || || ||||
Sbjct 164699 GCAACTTGGCTTCGCTGGCCTTGCCGTCCTTTGTGGACTACAATGAAGGCTGCTATGACT 164640
Query 19989 TTGCCAAA--TTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGA 20046
| ||||| || |||| || ||| || || || || ||||| |||||||
Sbjct 164639 T--CCAAAAGCTGCACGATGTTACCGAAGTTGTTGTTCGAAACTTGAATAAGATCATCGA 164582
Query 20047 TCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGC 20106
|||| ||||| || || | || || ||||||||| |||| || |
Sbjct 164581 CGTCAACTACTACCCCGTTCCGGAAGCACAGAACAGCAACATGCGCCACAGGCCCATTGG 164522
Query 20107 GATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCC 20166
||||||| ||||| || || || | ||| | || |||| | ||||| |||
Sbjct 164521 TGTCGGCGTTCAGGGTCTTGCAGATGCGTTCCTAGCCCTTCGCCTGCCTTTCGAGTCTCC 164462
Query 20167 CAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTC-CTGG 20225
|||| || ||||| |||||| || || ||| | | ||||| || || ||| |||
Sbjct 164461 TGAGGCACGAGAGCTGAACAAGCAGATATTTGAGACAATTTACCATGCCGCTCTCACTGC 164402
Query 20226 AATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGT 20285
| || || || ||||| ||| | ||||| ||| || | | | || || || | |
Sbjct 164401 TTCCATG-GAGCTTGCCAAGGAGCAAGGCCCATACTCCACATACGAAGGCTCTCCTGTAT 164343
Query 20286 CCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCA---CTGAGAATGAGTTTTGGA--- 20339
| | || || || ||| ||||||||| || | || || ||| |||
Sbjct 164342 CTCAAGGCATTCTGCAGTTTGACATGTGGAATGTGAAGCCTTCCGAT--CTTTGGGACTG 164285
Query 20340 -GC-GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCC 20397
|| | || |||| | |||||| | || || |||||||| |||| || || ||
Sbjct 164284 GGCATCGCTGAAGGAGCAAATCAAGGCGCATGGCATTCGCAACAGTCTGCTAGTAGCACC 164225
Query 20398 CATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAG-GCTTTCGAGCCGTACA 20456
||||| |||||| || |||||||| |||| ||||||||| ||||| ||||||||||
Sbjct 164224 AATGCCTACCGCCAGTACTTCCCAGATCTTGGGTAACAACGAGTGCTTT-GAGCCGTACA 164166
Query 20457 CGACCAACATCTAC 20470
| |||| ||||||
Sbjct 164165 CATCCAATATCTAC 164152
Score = 86.0 bits (94), Expect = 7e-12
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
|||||||| || ||||| ||||| |||||| ||| | ||||| || | | ||||
Sbjct 163814 TAGTACATTCCGGTCTTAAGACCGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTG 163873
Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318
||| | |||||| | ||| |||||| | ||||| ||||| || ||| | ||||||
Sbjct 163874 CCCATAGTCGGGTCTTTCATATGGATGTTCAAGGACTGAGACTGATCAATGAAGGCACCG 163933
Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378
|||||||| ||||| | || || | || | || ||||||| ||| ||| | |
Sbjct 163934 CGGTCGGCAGCCATCTGGACAACAGTACGCTGTGAGATTTCCCAGACAGTCTTGTAGAGG 163993
Query 78379 GCCTTCAGCTCTTCCTGGATGT 78400
|| || | ||| | ||||||
Sbjct 163994 GCTTTGATATCTGCGGGGATGT 164015
>seq4
Length=2394644
Score = 111 bits (122), Expect = 2e-19
Identities = 303/455 (67%), Gaps = 18/455 (4%)
Strand=Plus/Plus
Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032
|| || |||||||| | || || || ||| ||||| ||||||||| || | ||
Sbjct 143496 TTCGCTCAACGTCTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGCGGTGCCTTT 143555
Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092
| | || |||||| | || ||||||||||||||||| || || | ||||||||||||
Sbjct 143556 GCTTCCATCTTCTGGTTGAAGAAGCGTGGCCTCATGCCAGGTCTCACATTCTCCAACGAG 143615
Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCACACCTA 60152
|| || || || |||||||| |||||| || || || || | | |||||| | | |
Sbjct 143616 CTCATCTCGCGAGACGAGGGTCTCCATACTGATTTCGC-CTGTCTC-CTATTCTCTC--A 143671
Query 60153 TTGGAAAAAT-GCCCTTCCAAGGATATTCACAAGATTGT--TCAGTG-GGCTTGTGAAGT 60208
| || ||| | || ||| | | | || ||| || || ||| || |
Sbjct 143672 CTTGAGGAATCGACCAAGCAAACAAGTGGTCCAGGATGTTATCGTTGACGCTGTCAAAAT 143731
Query 60209 GGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGA 60268
||| |||||| | || || || || ||||| || | || ||| ||||
Sbjct 143732 TGAGCAAGAGTTCCTGACCGAGGCTCTGCCATGTGGTCTTCTTGGCATGAACGCGACCCT 143791
Query 60269 AATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTG-----GAGAA 60323
|||| |||||| || |||| || || || || ||| ||| | ||| |||||
Sbjct 143792 GATGAAGCAGTATATCGAGTTCGTTGCCGATCGACTCCTGGTCGCTCTTGGCAACGAGAA 143851
Query 60324 GGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGG 60383
|| || || | ||| ||||| ||||||| ||||||| |||||| | | ||
Sbjct 143852 GG---TATATAAG--GTGTCCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGCGGC 143906
Query 60384 AAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418
|||||||||||||| |||||||| |||| |||||
Sbjct 143907 AAGACCAACTTCTTCGAGAAGCGAGTCGCCGATTA 143941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524285758000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |