Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq16 253 2e-62
seq10 167 3e-36
seq25 136 5e-27
seq14 100 3e-16
seq1 98.7 1e-15
seq4 89.7 6e-13
>seq16
Length=1288267
Score = 253 bits (280), Expect = 2e-62
Identities = 894/1382 (65%), Gaps = 42/1382 (3%)
Strand=Plus/Plus
Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454
||||| |||||||| ||||||||| || | |||||| | || || || || |||||
Sbjct 164165 GTGTACGGCTCAAAGCACTCGTTGTTACCCAAGATCTGGGAAGTACTGGCGGTAGGCATT 164224
Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGAC 80514
|| | || | ||| || || | ||| ||| |||||| | ||| || || |
Sbjct 164225 GGTGCTACTAGCAGACTGTTGCGAATGCCATGCGCCTTGATTTGCTCCTTCAGCGATGCC 164284
Query 80515 CAA----AAATCAACCCCAACGCTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCC 80568
|| ||| | | || ||| | || ||||||||| ||||| ||||| |
Sbjct 164285 CAGTCCCAAAG--ATCGGAAGGCT-TCACATTCCACATGTCAAACTGCAGAATGCCTTGA 164341
Query 80569 GACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGAC 80628
|| | ||||| || || | || ||| ||||| | | |||||| ||||| ||
Sbjct 164342 GATACAGGAGAGCCTTCGTATGTGGAGTATGGGCCTTGCTCCTTGGCAAGCTCCATGGAA 164401
Query 80629 TCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGT 80688
| | || || || || ||||| |||||| | |||||||| | || ||||
Sbjct 164402 GCAGTGAGAGCGGCATGGTAAATTGTCTCAAATATCTGCTTGTTCAGCTCTCGTGCCTCA 164461
Query 80689 GGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATG 80748
|| ||||| | || || | | |||| | || || || |||||||||||||
Sbjct 164462 GGAGACTCGAAAGGCAGGCGAAGGGCTAGGAACGCATCTGCAAGACCCTGAACGCCGACA 164521
Query 80749 GCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTA 80808
| || || | ||||||| |||| || || ||||||| ||||| ||||
Sbjct 164522 CCAATGGGCCTGTGGCGCATGTTGCTGTTCTGTGCTTCCGGAACGGGGTAGTAGTTGACG 164581
Query 80809 TCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAG 80868
||||||| |||| ||| || |||||| |||||||| || || || || |||
Sbjct 164582 TCGATGATCTTATTCAAGTTTCGAACAACAACTTCGGTAACATCGTGCAGCTTTTGGAAG 164641
Query 80869 TCGAA------TTGGTTCCCCTTCACAAATGCCGG-AAGGCTCAGGGACGCCAGATTGCA 80921
|| | || || | |||||| | ||| ||||| ||| || |||| |||||
Sbjct 164642 TCATAGCAGCCTTCATTGTAGTCCACAAAGGACGGCAAGGC-CAGCGAAGCCAAGTTGCA 164700
Query 80922 CACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTT 80981
||||| ||||| || | | |||||| ||| |||||||| | ||| ||
Sbjct 164701 GACGGCGACCTCATCGGGGGCGCAGTACTCGATGATCTCCGTGCAGAGATTGGAGCTGCG 164760
Query 80982 AATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTA 81041
|| || || || || |||||||| |||| |||||||| || |||||| |||| |
Sbjct 164761 GATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGATTGCAAGCATCTTTGTAGAGCATGAA 164820
Query 81042 CGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGAC 81101
||| | ||||| || ||| | || |||||||| | ||||| || | |||||||
Sbjct 164821 AGGGTTTCCGGTTTCAGTCTGGGCCTCTAGGATGGCATACCAAAGCTTCTGTGCCTTGAT 164880
Query 81102 CACCTTGCGGAATTTGCCTTCGGC--CACATACTTGGCGTAAGCTTCGTCGAACTTGGCA 81159
|||||| ||| || || | ||||||| |||| | ||||||| | ||
Sbjct 164881 GGTCTTGCGACCCTTG--TTGAGCTTCTCATACTTTTCGTAGAGAGCCTCGAACTCGTCA 164938
Query 81160 CCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTC 81218
|||| | ||| ||| ||| | || || ||||| || |||||||| ||| ||| ||
Sbjct 164939 CCGTAGCAGT-CAGCCAGGCCGGGACATTCGTTGGGACACATCAGAGTCCAATCGCCGTT 164997
Query 81219 GTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCA 81278
|| || ||| ||||||||| ||||| ||||| |||||| ||| || || ||
Sbjct 164998 CTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAGGGCGAGGAAGAGATCACGTGC 165057
Query 81279 GCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATG 81338
||| | || || | || ||||| || | || | || || | | |||||||||
Sbjct 165058 GCGAACTTCTTCCTTGCCATGGTTCTTTCGGAGGTCCATGAACTCGAACACGTCCGCATG 165117
Query 81339 CCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTA 81395
||| ||||| || || | |||| | || ||| |||||| || | || ||
Sbjct 165118 CCAAGGCTCAAGGTAGATTGCGAAAGCGCCTGGGCGCTTGTTGCCACCTTGATCCACATA 165177
Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGT 81455
||| ||||| || || || |||| ||| || |||| ||| | || || || ||
Sbjct 165178 ACGAGCAGTGTTATTGAAGACTCGCAGCATGGGAATGACACCGTTGGAAGTGCCATTGGT 165237
Query 81456 ACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGA 81515
||| |||| || || |||| || | | ||| || || || ||||| |
Sbjct 165238 GCCCGCGATGTATGAACCGGTGGCACGGATACGGTGGATGTTGAGGCCAATACCACCAGC 165297
Query 81516 CCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTT 81575
| ||| || ||| ||||| || | ||| || ||||| ||||| ||||| || |
Sbjct 165298 CATCTTGGAGATCATTGCACAGGTCTTGAGGGTGTCGTAAATGCCCTCAATGCTGTCATC 165357
Query 81576 TTTCATGTC-------AAGCAAGAA-ACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCA 81627
|||||||| ||||| ||| |||| |||| ||||||| | ||| |||
Sbjct 165358 CTTCATGTCGACTAGGAAGCATGAAGACAG-TTGA-GCCTGAGGG------GTGCCCGCA 165409
Query 81628 TTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCC 81687
||||| || ||||| | || || ||||| | | | ||||||| || ||||||||
Sbjct 165410 TTGAAGAGGGTTGGCGAGGCATGTGTGAAAAACTTGCTGGACATCAAGTTGTAGGTTTCA 165469
Query 81688 TTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGG 81747
|||| || || || ||| || ||||||| ||| |||||||| | ||||| ||||
Sbjct 165470 ATGACTCGCTCAACATTGTCTCCCCAGATACCGACAGCAACACGCATGATCATGTGCTGG 165529
Query 81748 GG 81749
||
Sbjct 165530 GG 165531
>seq10
Length=1675152
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || ||||| ||||||||||||
Sbjct 200017 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTTGAGTCATCC 200076
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| | || ||||| ||||||||||| || || |||||||||
Sbjct 200077 GATACCATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 200136
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| | ||||| | ||| || || | ||||| ||
Sbjct 200137 CAGCGACTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGAACGCTCTCGGACTACAAC 200196
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || || || ||||| ||| | || ||||| |||||
Sbjct 200197 ATTCAGAAGGAGTCTACCCTCCATCTCGTCCTCCGCCTTCGTGGTGG 200243
Score = 152 bits (168), Expect = 6e-32
Identities = 174/231 (75%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||| ||||| ||||| | || || ||||| |
Sbjct 200245 ATGCAGATCTTCGTCAAGACCCTCACCGGAAAGACCATTACGTTGGAAGTAGAGTCGTCT 200304
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || |||||||| |||||||| || || |||||||||
Sbjct 200305 GACACAATCGACAACGTAAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCAGACCAG 200364
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|| ||||| || || ||||||||||| || || || | ||| ||||| ||| ||||| ||
Sbjct 200365 CAACGTCTTATCTTCGCTGGTAAGCAGCTGGAAGACGGTCGCACCCTGAGC-GACTACAA 200423
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| || || || || ||||| | ||||| ||||| || ||
Sbjct 200424 CATCCAGAAGGAGTCTACGCTCCACTTAGTCCTCCGTCTGCGCGGCGGCCA 200474
Score = 131 bits (144), Expect = 2e-25
Identities = 129/167 (77%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| || ||||| || || |||||||| ||||| |||| || | || | ||| |
Sbjct 199660 ACTGGAAAGACCATCACCCTTGAGGTGGAGTCTTCGGATACTATCGACAACGTCAAGTCG 199719
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||||||||| |||||||||||||| || || |||||||| |||
Sbjct 199720 AAGATCCAGGACAAGGAGGGAATTCCCCCAGACCAGCAGCGCCTGATCTTTGCTGGCAAG 199779
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGA 27596
|| |||||||||| || ||||| | ||||| || |||| |||||
Sbjct 199780 CAGCTCGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAGGA 199826
>seq25
Length=449666
Score = 136 bits (150), Expect = 5e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| ||||| ||||| || ||||| || |||||||| || || ||||| |||||
Sbjct 296372 ATCATGCAGATCTTCGTCAAAACCCTTACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 296431
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | ||| | ||| | ||| | || || || ||||||||||| || || ||||||
Sbjct 296432 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGCATCCCGCCAGAC 296491
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|| ||||| | || || || || ||||| |||||||| | || |||||| | || ||
Sbjct 296492 CAACAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTATCTGATTAC 296551
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | || ||||| || ||| | || || || ||||||| || || ||
Sbjct 296552 AACATTCAGAAGGAGTCGACTTTGCACCTGGTGCTGCGTCTACGAGGAGG 296601
>seq14
Length=1339294
Score = 100 bits (110), Expect = 3e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467
|||||| ||||| ||||| ||||||||||| || ||||||||| | | || ||
Sbjct 355186 GCAAATATTTGTGAAGACTAAGACCGGCAAGACAATAACTCTTGAGTGTCACCCATCAGA 355127
Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527
| || | ||| | ||| ||||||||| |||||||| || ||||| |||||||||||
Sbjct 355126 CACGATCGACAATGTCAAGAGTAAAATTCAAGACAAGGAAGGTATTCCACCAGACCAGCA 355067
Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562
|| || || ||||| || ||||| | || ||||
Sbjct 355066 ACGACTGATCTTTGCAGGAAAGCAGTTGGAAGATG 355032
>seq1
Length=3506016
Score = 98.7 bits (108), Expect = 1e-15
Identities = 199/293 (68%), Gaps = 2/293 (1%)
Strand=Plus/Plus
Query 31953 AGATATCAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGT 32012
||| | || ||||||||| || ||| ||||| | |||||| || || || ||
Sbjct 2041192 AGACAACATGCGGTCCATCCCCTCCGTTATTGACGGATTGAAGCCTGGTCAACGAAAAGT 2041251
Query 32013 GATATACGCCTGCCTCAAGAAGAACCTG-TCGAGTGACATGAAGGTGGCGCAGCTGTCGG 32071
|| ||||| || ||||||||||| | || || ||| |||||| | || | |
Sbjct 2041252 CATTTACGCATGTTTCAAGAAGAACATTCTCAAG-GACCAGAAGGTCATTGAATTGGCTG 2041310
Query 32072 GCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTG 32131
| ||| | | |||||||| | |||||||| || || | ||||| ||| || ||
Sbjct 2041311 GTTACATCTCCGAGCAAACTTCGTATCACCATGGTGAAGTTTCGCTGCAGCAAACAATCA 2041370
Query 32132 TCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGAC 32191
|| ||| || || | ||| |||||| | || ||| | |||| ||||| || ||||
Sbjct 2041371 TCGGCCTCGCACAAACCTTCGTCGGTTCCAACAACGTCAACTGCCTCGAACCCAGTGGAA 2041430
Query 32192 AGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244
| ||||| | || |||||||||||| || ||||| || | ||||| |||
Sbjct 2041431 ATTTTGGATCACGTCTCGCCGGTGGCTCAGACGCTGCTAGTCCTCGTTATATC 2041483
>seq4
Length=2394644
Score = 89.7 bits (98), Expect = 6e-13
Identities = 257/388 (66%), Gaps = 13/388 (3%)
Strand=Plus/Plus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGATGAAT--CGTGG-GTCGTCGTTTGGTCAGCGT 64719
|| |||||||| |||||||| || ||||| | | | ||| | || | ||| |||
Sbjct 143448 AAGAAGGCTGACTGGGCCATTCGATGGATTACCGACAAGAAGTCTACCTTCGCTCAACGT 143507
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|| | || || || || ||||| || ||||| || | || ||| || |||
Sbjct 143508 CTTGTTGCCTTCGCTGCCGTCGAAGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATCTTC 143567
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||| | || ||||| ||||| ||||||||||| | || || |||||||| ||||| ||
Sbjct 143568 TGGTTGAAGAAGCGTGGCCTCATGCCAGGTCTCACATTCTCCAACGAGCTCATCTCGCGA 143627
Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAG----GACAA 64895
|||||||| ||||| || || || | ||| ||| ||| | | | ||| |
Sbjct 143628 GACGAGGGTCTCCATACTGATTTCGCCTGTCTCCTATTCTCTCACTTGAGGAATCGACCA 143687
Query 64896 ACCATCACATG-GGACTATAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAAGGAAT 64954
| || ||| | || | | | || ||| || | ||||| ||||||| | || |
Sbjct 143688 AGCA-AACAAGTGGTCCAGGA-TGTTATCGTTGA---CGCTGTCAAAATTGAGCAAGAGT 143742
Query 64955 TCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGT 65014
|| | || | || || || ||| |||| | |||||| | || |||||| ||||
Sbjct 143743 TCCTGACCGAGGCTCTGCCATGTGGTCTTCTTGGCATGAACGCGACCCTGATGAAGCAGT 143802
Query 65015 ATATCGAATTTGTAGCAGATCGCCTGCT 65042
||||||| || || || ||||| || ||
Sbjct 143803 ATATCGAGTTCGTTGCCGATCGACTCCT 143830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309865334000
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