Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02- 10] 75 sequences; 42,602,674 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq16 82.4 7e-11 >seq16 Length=1288267 Score = 82.4 bits (90), Expect = 7e-11 Identities = 192/284 (68%), Gaps = 12/284 (4%) Strand=Plus/Plus Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTT--C 34378 ||| |||||||||||||| | |||| || || || || || ||||| | || || | Sbjct 729149 GGGCGTGAAGATCTGGGATGGCAACGGCTCCCGCGAGTTCCTTGACAACCTAGGATTGAC 729208 Query 34379 CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGG 34438 ||| || ||||||||||| | || || ||||| || ||||||||| ||||||| || Sbjct 729209 CCA--CCGTAAGGAGGGCGACCTTGGACCCGTCTATGGCTTCCAGTGGCGACACTTCGGC 729266 Query 34439 GCGGAGTATCGGGGGAGCG-AAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTA 34497 || || || || || ||| | | ||||| | || || || | |||||||| | | Sbjct 729267 GCCGACTA-CGTGGATGCGTCAACTGACTACACCGGCCAAGGCGTCGACCAGCTTGCGGA 729325 Query 34498 CGTGATCGACACCTTGAAGCGGAACCCT---GATGACAGAAGGATCGTGATGTGCGCGTG 34554 ||| || ||| || ||| ||| ||| | ||| |||| | | ||| || Sbjct 729326 CGTCATACACAAGCTGCGTACGAATCCTTACGATCGCCGAATGATC---CTTTCCGCCTG 729382 Query 34555 GAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACA 34598 ||||||| || | ||| ||||| | | || ||||| |||| Sbjct 729383 GAACCCGCGAGACTTGCCTAAGATGGTGTTGCCGCCGTGTCACA 729426 Score = 82.4 bits (90), Expect = 7e-11 Identities = 192/284 (68%), Gaps = 12/284 (4%) Strand=Plus/Minus Query 6747 TGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGA 6806 |||| ||||| || | | ||||| ||| | || ||||||||| ||| | | || Sbjct 729426 TGTGACACGGCGGCAACACCATCTTAGGCAAGTCTCGCGGGTTCCAGGCGGAAAG---GA 729370 Query 6807 TCCTTCTGTCATC---AGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCG 6863 || ||| | ||| ||| ||| || ||| || |||| | |||||||| Sbjct 729369 TCATTCGGCGATCGTAAGGATTCGTACGCAGCTTGTGTATGACGTCCGCAAGCTGGTCGA 729310 Query 6864 CTCCCTGTCCCGAATAGTCCGCTT-CGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCAC 6922 | || || || | ||||| | | ||| || || || || || || ||||||| |||| Sbjct 729309 CGCCTTGGCCGGTGTAGTCAGTTGACGCATCCACG-TAGTCGGCGCCGAAGTGTCGCCAC 729251 Query 6923 TGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGG--AACCCCCGCTTGT 6980 ||||| || ||||| || || | ||||||||||| || |||| || || | |||| Sbjct 729250 TGGAAGCCATAGACGGGTCCAAGGTCGCCCTCCTTACGG--TGGGTCAATCCTAGGTTGT 729193 Query 6981 CCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024 | || || || || || |||| | |||||||||||||| ||| Sbjct 729192 CAAGGAACTCGCGGGAGCCGTTGCCATCCCAGATCTTCACGCCC 729149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261979754000