Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq25 109 4e-19
seq10 89.7 3e-13
>seq25
Length=449666
Score = 109 bits (120), Expect = 4e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| |||||||| ||||| || || ||||| ||||| || || || |
Sbjct 296375 ATGCAGATCTTCGTCAAAACCCTTACGGGGAAGACTATCACCCTCGAGGTGGAGTCTTCC 296434
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | | ||||| || || | |||||||| ||
Sbjct 296435 GACACCATCGACAATGTCAAGTCCAAGA-TCCAAGACAAGGAGGGCATCCCGCCAGACCA 296493
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| || || || |||||||| || || || |||| || || || ||||||||
Sbjct 296494 ACAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTATCTGATTACAA 296553
Query 23790 CATACAAAAAGAGTCCACATTACA 23813
||| || || ||||| || || ||
Sbjct 296554 CATTCAGAAGGAGTCGACTTTGCA 296577
>seq10
Length=1675152
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||| || || |||||||||||||| ||||| || |
Sbjct 200017 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACTCTCGAGGTTGAGTCATCC 200076
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | || | |||| || ||| ||||| || || | || ||||| ||
Sbjct 200077 GATACCATCGATAACGTAAAGTCCAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 200136
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || || ||||| || |||| |||| || || | || ||||||
Sbjct 200137 CAGCGACTCATCTTCGCGGGCAAGCAGTTGGAGGACGGTCGAACGCTCTCGGACTACAAC 200196
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 200197 ATTCAGAAGGAGTCTAC 200213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009291038100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |