Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq10 131 1e-25
seq25 129 4e-25
seq1 82.4 5e-11
>seq10
Length=1675152
Score = 131 bits (144), Expect = 1e-25
Identities = 152/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 44134 GTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTG 44193
||| ||||| |||||| ||||||||||| ||| || ||| |||| ||||||||
Sbjct 200448 GTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCTTCCAGCTG 200389
Query 44194 CTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTT 44253
||| || || ||||| | ||| ||||| |||| || | ||| ||||| ||| |||||
Sbjct 200388 CTTACCAGCGAAGATAAGACGTTGCTGGTCTGGTGGGATACCCTCCTTATCCTGAATCTT 200329
Query 44254 CTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGT 44313
||| | | | || ||||| | || || || |||| |||||| |||||||| ||
Sbjct 200328 GGACTTTACGTTGTCGATTGTGTCAGACGACTCTACTTCCAACGTAATGGTCTTTCCGGT 200269
Query 44314 GAGGGTCTTCACGAAGATTTGCATG 44338
||||||||| |||||||| ||||||
Sbjct 200268 GAGGGTCTTGACGAAGATCTGCATG 200244
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| || |||||||| || | ||| || |||| |||| |||||| || || ||
Sbjct 200208 CTCCTTCTGAATGTTGTAGTCCGAGAGCGTTCGACCGTCCTCCAACTGCTTGCCCGCGAA 200149
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||| | |||||||| |||| || | || ||||| || ||||| ||| | |
Sbjct 200148 GATGAGTCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCTTGGACTTTACGTT 200089
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| ||||| |||| || || ||||| | || |||||||| || ||||||||||| ||
Sbjct 200088 ATCGATGGTATCGGATGACTCAACCTCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTGAC 200029
Query 44326 GAAGATTTGCAT 44337
|||||| |||||
Sbjct 200028 GAAGATCTGCAT 200017
Score = 89.7 bits (98), Expect = 4e-13
Identities = 121/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206
||||| ||||||||||| |||| ||| || | || || |||||||| || ||||||
Sbjct 199826 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 199767
Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266
|||| |||||||| |||| || | || ||||| ||| |||||| ||| | |
Sbjct 199766 ATCAGGCGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 199707
Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGA 44315
| || || || | || |||||||| | || || |||||||| ||||
Sbjct 199706 TCGATAGTATCCGAAGACTCCACCTCAAGGGTGATGGTCTTTCCAGTGA 199658
>seq25
Length=449666
Score = 129 bits (142), Expect = 4e-25
Identities = 169/232 (73%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| |||| || | || ||||||||| | || |||||| || ||||||||||| |
Sbjct 296601 CCTCCTCGTAGACGCAGCACCAGGTGCAAAGTCGACTCCTTCTGAATGTTGTAATCAGAT 296542
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || |||| || |||||||| ||||| |||||||| ||||| || |||| ||
Sbjct 296541 AGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGCGGG 296482
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| || ||||| || ||||| ||| || ||| | |||||||||| || ||||
Sbjct 296481 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGT--CGATGGTGTCGGAAGACTCCA 296424
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
|||| | || || ||||| ||||| ||||| || |||||||| ||||||||
Sbjct 296423 CCTCGAGGGTGATAGTCTTCCCCGTAAGGGTTTTGACGAAGATCTGCATGAT 296372
>seq1
Length=3506016
Score = 82.4 bits (90), Expect = 5e-11
Identities = 129/183 (70%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||| ||||||||||| || | ||||| || | || |||| ||| || ||||| ||
Sbjct 194384 CCTTCTGGATGTTGTAGTCAGAAAGAGTT--CGGCCATCCTCCAACTGTTTTCCGGCGAA 194441
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||||| || || || || | ||| | || ||||| || || || ||||| |
Sbjct 194442 AATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTATCTTGGATTTTGGACTTCACATT 194501
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||| | ||| || ||||||| || || ||||| ||||| || ||||||||
Sbjct 194502 GTCGATCGTGTCCGAGGACTCGACCTCCAAAGTGATGGTCTTGCCCGTCAGAGTCTTCAC 194561
Query 44326 GAA 44328
|||
Sbjct 194562 GAA 194564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990070946275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |