Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02-
10] 36 sequences; 42,868,360 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 1e-18
>seq3
Length=2371949
Score = 109 bits (120), Expect = 1e-18
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 230428 GACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAA 230487
|| ||| | |||||| | ||| ||||||||||||| || ||| ||||| |||||
Sbjct 2245235 GAGGCTCTGCCATGTGGTCTTCTTGGCATGAACGCGACCCTGATGAAGCAGTATATCGAG 2245176
Query 230488 TTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAAC 230547
||||| ||||| || | | || || ||||| ||||||| || || || |||
Sbjct 2245175 TTCGTTGCCGATCGACTCCTGGTCGCTCTTGGCAACGAGAAGGTATATAAGGTGTCCAAC 2245116
Query 230548 CCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGT 230607
||||| | || |||||| ||| || ||| || ||||||||||||||||| |||||
Sbjct 2245115 CCCTTCGACTTCATGGAGAACATCTCTCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGA 2245056
Query 230608 GTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||| || || |||| | |||| ||| ||
Sbjct 2245055 GTCGCCGATTACCAGAAGGCTGGCGTGCTG 2245026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823512078680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |