Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3 109 1e-18 >seq3 Length=2371949 Score = 109 bits (120), Expect = 1e-18 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 230428 GACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAA 230487 || ||| | |||||| | ||| ||||||||||||| || ||| ||||| ||||| Sbjct 2245235 GAGGCTCTGCCATGTGGTCTTCTTGGCATGAACGCGACCCTGATGAAGCAGTATATCGAG 2245176 Query 230488 TTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAAC 230547 ||||| ||||| || | | || || ||||| ||||||| || || || ||| Sbjct 2245175 TTCGTTGCCGATCGACTCCTGGTCGCTCTTGGCAACGAGAAGGTATATAAGGTGTCCAAC 2245116 Query 230548 CCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGT 230607 ||||| | || |||||| ||| || ||| || ||||||||||||||||| ||||| Sbjct 2245115 CCCTTCGACTTCATGGAGAACATCTCTCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGA 2245056 Query 230608 GTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||| || || |||| | |||| ||| || Sbjct 2245055 GTCGCCGATTACCAGAAGGCTGGCGTGCTG 2245026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823512078680