Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557505.1_202016-02- 10] 36 sequences; 42,868,360 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 105 7e-18 >seq3 Length=2371949 Score = 105 bits (116), Expect = 7e-18 Identities = 203/297 (68%), Gaps = 3/297 (1%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || |||||||| || ||| | || ||||| ||||||||||| ||||| Sbjct 2245656 ATATATGTGTCGATGAGCAGAGAGTATGTCTCCGAGTGGATGTTCTCCATCATAATCTGG 2245715 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || || || | || || || || | ||||| || | ||| Sbjct 2245716 AAGCCGTAGAAGCAGCGAGCCTCAGGGATCTGGACCTCGCTGCTGAATCTCTCGACGAGA 2245775 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| |||||||| || ||||||||| || ||||| || || ||||| ||| Sbjct 2245776 TTCTCGTTGACGATGCCATCAGACGCGGCGAAGAAGGCCAAAATGTGTGAGATGAAGTAT 2245835 Query 17414 TTTTCGTC--CGGTG-TAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 || ||||| || || | | ||| || | | ||| ||||| | ||| | || Sbjct 2245836 TTCTCGTCGTCGTTGATCTTGTTGTTCCAATCGTGAAGATCCTTGGACAGATCAATCTCC 2245895 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTAT 17527 || | |||||| || || | ||||| || ||||| | |||||| | |||| || Sbjct 2245896 TCAGCGGTCCAGAAGGACGCTTCGGCCTTCTTGTACATTTGCCAAATCTAATTGAAT 2245952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545367104480